Saprolegnia parasitica: SPRG_05006
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Entry
SPRG_05006 CDS
T04137
Name
(RefSeq) translation factor pelota
KO
K06965
protein pelota
Organism
spar
Saprolegnia parasitica
Pathway
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPRG_05006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_05006
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPRG_05006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
CedA
Motif
Other DBs
NCBI-GeneID:
24127419
NCBI-ProteinID:
XP_012198909
UniProt:
A0A067CU15
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MKLLKRSISEKDGNGSVILRAEDPEDMWHVFNLMHRGDTVKTTTVRKVVKEGATGSTTSQ
RMRMTLCLQMEHIDFDPIKCLLRIRGKNVEENPHVRMGAYHTIDLELNKDFTLAKQCWDV
MTLERIDMACNVAKQAEAAAVVMQAGLAHLCLIKGHMTVIRAKLETSIPRKRTGNTSHAK
GMERFYDSIVQAIKRHVDFSLVKCVLLASPGFVKDDFFKFMMEYAVRSDDKLLLENKSKF
ILCHASSGHKHALDEVLTDPKVQVQLEDTKAAGDVKCLETFFEMLHTDQDKAYYGYNHVV
KANQQMAIDTLLITDALFRSQDLAVRRKYIDLVENVRANGGHARVFSSLHVSGDKLGQLS
GVAALLRFPLPDLDEDDKDGDSDDENDLAKQASAVIELDDTDIEYM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgaagcgcagcatcagcgagaaggacggcaatggcagcgtgatcctccgc
gccgaagacccggaagacatgtggcatgtgttcaacctcatgcatcgcggcgacacggtc
aagaccaccacggtgcgcaaggtcgtcaaggaaggcgcgacgggctcgaccacgagccag
cgcatgcgcatgacgctttgcttgcagatggagcacattgactttgacccgatcaagtgt
ctcttgcgcatccgcggcaagaacgtcgaggagaacccccacgttcgcatgggcgcctac
cacacaatcgacttggagctcaacaaggactttacgctcgccaagcagtgttgggacgtc
atgacgctcgagcgcatcgatatggcgtgcaacgtggccaagcaagccgaggccgctgcc
gtggtcatgcaagctggcctcgcgcacctctgtctcatcaaagggcacatgacggtgatt
cgtgccaagctcgagacatcgattccgcgcaagcgcacaggcaacacgtcgcatgcgaag
ggcatggagcgcttctacgacagcatcgtccaggcgatcaagcgccacgtcgactttagc
ttggtcaaatgcgttctcttggcgagtccgggctttgtgaaggacgactttttcaagttt
atgatggagtacgcggtgcgatccgacgacaagctgctgcttgagaacaaatccaagttt
attctctgccacgcgtcgtcggggcacaagcacgcactcgacgaagtgctcaccgacccg
aaagttcaggtgcagctcgaagacaccaaggcggccggcgacgtcaagtgcctcgaaacg
ttctttgagatgctccacaccgaccaagacaaggcatactacggctacaaccacgttgtc
aaggccaaccagcaaatggccattgacacgctcctcatcacggacgcactcttccgcagc
caggaccttgcggttcgccgcaagtacattgatctggtcgagaacgtgcgtgcgaacggc
ggccacgcccgcgtctttagcagcctccacgtctcgggcgacaagctcgggcagctcagc
ggcgttgcggcgctgcttcgcttcccgctccccgacctcgatgaagacgacaaggacggc
gattcggacgacgagaacgacctcgccaagcaagccagcgccgtcatcgagcttgacgac
acggacatcgagtacatgtag
DBGET
integrated database retrieval system