Saprolegnia parasitica: SPRG_05046
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Entry
SPRG_05046 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
spar
Saprolegnia parasitica
Pathway
spar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SPRG_05046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spar04131
]
SPRG_05046
Membrane trafficking [BR:
spar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SPRG_05046
Hops complex
SPRG_05046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
DUF6931
Motif
Other DBs
NCBI-GeneID:
24127455
NCBI-ProteinID:
XP_012198945
UniProt:
A0A067CM83
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDPSEWHALGEAQYQRHHLFDMGASWREEVASVGDLKDFDVVPAQYGGPVALLRKSQLLV
KMDAKGSLSRTLFIFNACGSRLASISFKEYDEKKKTLLGMAWTDEMRLLCVFDDGLCVTY
SIMGELENSFNIVSRNLNTKIWSFESWGGGIACLLGNYMVVQVMDIDSVSPRIDLIMETG
ISEANPPTCMAVLHPRFVKTSMPEIFLGTSAKSLVVLSKLPGSNKDSMTDMHLEESIKAP
IEAIAIAPNGMFMAMYTQDGVLTVLNTNFDKKILEFETSSKATPKSMLWCGEDSVVLYWQ
NVGLIMVGPLGSWLKFPCDGPVELCQEVDSCRLYSSRGHELLMRVPKATESIKRIGSTSP
AAMLFDALDAFDSGDAKADENIRSIQVHKTLEQAITDCIHAAGNEFDYAAQLSLLRAAAY
GKCFFDNSADARSSGYDSELFVDMSRKLRVLNALRKPSVGLPLTLRQFDRLTSDVVVSRL
VAMRQHYLAIKICEYLKISPDRVLVHWACEKVKASFGDAPMTDEAVVSLVRKKLKDATLV
SYSEIASCAERAGRRRLATMLLDLEENASDQVPLLLSMGECELALRKALESSQTDLIYMA
LFHMERLVPTDDFRRVLQSEPMYADAIHLITSYYIGTGEARDKLDAIWPDMASANYDVLQ
SFQMIDVDAKLKVLKDAMAKFNVAKLPINAKLTEEQMDLLVEQKKLDEKAAPHMTTSFVG
LSLSDTIKQLCMDAKRDPKSLQLAAGLAKKFKVPEKRFYHVKIKALAETQQWDTLHKFSQ
EKKTPPCGFKAFAVACLREGEKGQAESYAARITQPDEKFDTFIHLQMWLAALELAVKLKD
PEKLSMVRNNCQSPDIQAQVDQAAQQLGFI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatccctccgagtggcacgcgctgggcgaggcccagtaccagcgccaccacctcttc
gacatgggcgcgtcgtggcgcgaggaggtggcgtctgtcggcgacctcaaggactttgat
gtcgtgccggcgcagtacggcggtcccgtcgcgctgctccgcaagtcgcagctgctcgtg
aaaatggacgccaaagggtctctgagtcggacgctctttatcttcaacgcgtgcggtagc
cgcctcgcatccatctcgttcaaggagtacgacgagaagaagaagacgctcctcggcatg
gcgtggacggacgagatgcgcctcttgtgcgtctttgacgacgggctctgcgtcacgtac
agcatcatgggcgagctcgaaaactcgttcaacattgtgtcgcgcaacctcaacacgaag
atctggagcttcgagtcgtggggcggcggcatcgcctgtctcctcggcaactacatggtc
gtgcaggtcatggacattgactcggtctcgccgcgcatcgacctcatcatggagacgggc
atttccgaggcgaacccgccgacatgcatggcggtgctccacccgcgcttcgtcaagacc
agcatgcccgagatcttcctcggcacgtcggccaagtcgctcgtcgtgctctccaagctg
ccgggcagcaacaaggactcgatgacggatatgcacctcgaagagtcgatcaaggcgccg
atcgaagcgattgcgatcgcgcccaatggcatgtttatggccatgtacacccaagacggc
gtcctcaccgtgctcaacaccaattttgacaagaagattctcgagtttgagacatcgtcg
aaagcaacgccaaagagcatgctctggtgcggcgaagactcggtcgtgctctactggcaa
aacgtcggcctcatcatggtcgggccgctcgggtcctggctcaaatttccgtgcgacggc
cctgtcgagctctgccaagaagtcgactcgtgccgcctctacagcagccgcggccacgag
ctcctcatgcgcgtcccgaaagccacagaaagtatcaagcgcattggcagcacgtcgccg
gctgcgatgctctttgacgcgctcgatgcgttcgactcgggcgacgccaaagccgacgag
aacattcggtcgatccaagtgcacaagacgttggagcaagcgatcaccgactgcatccac
gcggccggcaacgagtttgattatgcggcgcagctttcgctccttcgcgcggcggcgtac
ggcaagtgcttcttcgacaacagcgccgacgcgcgcagctcgggctacgattccgagctc
tttgtcgacatgagccgcaagctgcgcgtgctcaacgcgctccgcaagccgtctgtgggt
ctcccactgacgctccggcagtttgaccggctcacgagcgacgtggtcgtgtctcgcctc
gtggccatgcgccagcactacctcgcaatcaagatttgcgagtacctcaagatctcgcca
gaccgcgtcctcgtccactgggcgtgcgagaaggtcaaggcctcgtttggggacgcaccc
atgacggacgaagccgtcgtgtcgcttgtccggaagaagctcaaggacgcgacgcttgtc
tcgtactcggagattgcgagctgcgccgagcgcgcgggtcgtcgccgcctcgccacgatg
ctcttggacttggaagaaaacgcgtcggaccaagtcccgctcttgctctccatgggcgag
tgcgagctcgcactgcgcaaggcgctcgagtcgagccagacggacctcatctacatggca
ctcttccacatggagcggcttgtaccgaccgacgactttcgccgcgtgctccagtcggag
cccatgtacgcggatgcgatccacctcattacgtcctactacattggcacgggcgaggcg
cgcgacaaactcgatgcgatttggcccgacatggcgagcgccaattacgacgtgctgcag
tcgttccagatgatagacgtggacgcgaagctcaaggtgctcaaggacgcgatggccaag
ttcaacgtcgccaagcttccgatcaacgccaagctcaccgaagagcagatggacctcctc
gtcgagcagaagaagctcgatgaaaaggcagcgccgcacatgacaacctcgttcgttggg
ctttcgctcagcgacacgatcaagcagctctgcatggacgccaagcgggatcccaagtcg
ctgcaactcgcggccggcctcgccaagaagttcaaggtccccgagaagcggttttaccac
gtcaagatcaaggcgctcgccgagacgcagcagtgggacaccctccacaagttttcccaa
gagaagaagacgccgccgtgcggcttcaaggcgtttgcggtcgcgtgcctccgcgaaggc
gagaagggccaagccgagtcgtacgcagcgcgcatcacgcagcccgacgagaagtttgat
acgtttatccatctgcaaatgtggctcgcggcgctcgagctcgcggtcaagctcaaggac
ccggagaagctctcgatggtgcgcaacaattgccagtcgcccgacatccaggcgcaggtc
gaccaggccgcgcagcagctcggcttcatctaa
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