KEGG   Saprolegnia parasitica: SPRG_05301
Entry
SPRG_05301        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
spar  Saprolegnia parasitica
Pathway
spar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPRG_05301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_05301
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPRG_05301
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SPRG_05301
SSDB
Motif
Pfam: NOT2_3_5_C Keratin_2_head
Other DBs
NCBI-GeneID: 24127701
NCBI-ProteinID: XP_012199289
UniProt: A0A067CH96
LinkDB
Position
Unknown
AA seq 474 aa
MSVLDPSKDKLAYFKDNIQTAEDQEEFDASQYYYNRQDGFFKQSPGMGGTPRERKRCKLS
CCRAIGDPSQAGLQMGMQPGVYPGYSSGAAQPQMASFLAATSTGIGMGSMGMAGMGMGGM
AGMGMGSAVRSVPPTTPTASGLMDNYLASRIAEPATTPITMATKVRTFEKSPDMSEFPAL
TARSSSVDENSPAFRQNSEFVIQKEDFPALSSFGAEGRPTEKAANQGMSSSNDAMLQRTS
QPSTSSTSSSIGSRSGTHVNATFANVGGFQSANNLAVNSFPPLHANDAKPHPSSRPSSSS
SEETSRFGLLGMLHVIRATDPERNVAQGCDLTSLGLNLNSSEPLHPTFASPWSDTPCTKE
PQYTLPLCYYNQPPVLKTSHLSKFQLETLFYIFYSMPKDVVQAYAAQELYLREWRYHMDL
KLWFKRQQSESAALQYIYFDINTWERRLFGGNPSAVSAGFMTDDDVRVKFTPTP
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcgtcctggacccgtcgaaggacaagctggcatacttcaaggacaacatacagacg
gcagaggaccaggaagagtttgatgcgagccaatactactacaaccggcaggacgggttc
ttcaagcagagcccaggcatgggaggtacgcctcgggaacgcaagcggtgcaagctcagt
tgttgtcgtgcaataggtgacccgagccaagcgggcttgcagatgggcatgcagccgggc
gtctaccctggctacagcagcggcgctgcccagccgcaaatggcgtcgttcctagcggcg
acgtcaaccggcatcggtatgggctccatggggatggccggtatgggcatgggcggcatg
gctggcatgggcatgggcagcgccgtaagaagcgtaccaccgacgacgccgacagcgtcg
ggtttgatggacaactacctggcgtcgcgcatcgccgagccggctacgactcccatcacc
atggccaccaaagtgcggacattcgaaaagtcacccgacatgtcggagtttccggcattg
actgcgcggagtagctcggtcgatgaaaactcgcctgcgtttcggcaaaactctgagttt
gtgattcaaaaagaggactttccggcgctctcgtcgtttggcgccgagggtcgaccgacg
gagaaggctgcgaaccaaggcatgtcatcgtcgaacgacgcgatgctgcagcgcacgagc
cagccgtcgacaagcagcacgtcatcgtccattgggtcccgctcgggcacgcacgtgaac
gcgacctttgccaacgtcggcggtttccagtcggccaacaacctcgcggtcaactcgttc
ccgccgctgcacgcaaacgacgccaagccgcacccgtcgtcgcgaccgtcgtcgtcgtcg
tcggaagaaacgtcgcgctttggcctcctcggcatgctgcacgtcatacgcgcgaccgac
ccggaacgcaacgtggcgcagggctgcgacctcacgtcgctgggcctcaacctcaactcg
tccgaaccgctgcacccgacgtttgcttcgccgtggtcagacacgccgtgtacaaaggag
ccgcagtacacgctgccactttgctattacaaccagccgcccgtgctcaagacgtcgcac
ctctccaagtttcagcttgagacgctcttttacatcttttactcgatgcccaaggacgtc
gtgcaagcgtacgcagcccaggagctctacctgcgtgagtggcgctaccacatggacctc
aagctctggttcaagcgacagcagagcgagtcggcggcgctgcagtacatatactttgac
atcaacacgtgggagcggcgtctctttggcggcaacccgagcgcggtcagcgccggcttt
atgaccgacgacgacgtccgagtcaagtttaccccgacgccgtag

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