Saprolegnia parasitica: SPRG_05398
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Entry
SPRG_05398 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
spar
Saprolegnia parasitica
Pathway
spar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPRG_05398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_05398
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SPRG_05398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFII28
TetR_C_25
Motif
Other DBs
NCBI-GeneID:
24127794
NCBI-ProteinID:
XP_012200033
UniProt:
A0A067CEI4
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MDDLDELLRDEDEDEDEDDAKSSVETGDEDNGDDAKSNENSEDEASVETPEAVDAGGETA
EDEPYDTADDDAPDDEDEDMGAEAGPMDMLRFIQAMPEADVRRHEQFRRSHFDKNVIKRC
MTQVIEEACVGERRVPPVHNAMSIVMSGLAKMFLGELIAEARKIMAHAGDDGPIRPHHLR
EAHRKYYKRHPLIRGRNRRRLLK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctggacgagctcctgcgcgacgaggatgaggacgaagacgaagacgacgcc
aagtcgagcgtcgagactggcgacgaggacaacggcgacgatgccaagtccaacgagaac
agcgaggacgaggccagcgtcgagacgccagaagccgtcgacgccggcggcgagacggca
gaagacgagccgtacgacacggccgacgacgacgcgccagacgacgaagacgaagacatg
ggcgccgaggctggacctatggacatgctgcgcttcatccaggccatgcccgaggccgac
gtgcgccgccacgagcaattccgccggtcccactttgacaagaacgtcatcaagcggtgc
atgacgcaggtgatcgaagaggcctgcgtgggcgagcgccgcgtcccgccggtccataac
gccatgtccatcgtcatgtcggggctggccaaaatgtttctcggcgagctcattgccgaa
gcgcgcaagataatggcgcatgccggcgacgacgggccgatccggccgcaccacctccgc
gaggcccaccgcaagtactacaagcgccatccgttgatccgcgggcgcaaccggcgccgg
ctgctcaagtaa
DBGET
integrated database retrieval system