Saprolegnia parasitica: SPRG_05585
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Entry
SPRG_05585 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_05585
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
90S particles
Other 90S particles
SPRG_05585
Pre-60S particles
Other pre-60S particles
SPRG_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT
XMAP215_CLASP_TOG
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
24127975
NCBI-ProteinID:
XP_012199692
UniProt:
A0A067CS67
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MDVFSELRRHAGGNHAPKVKLNIVLAAITDVILERRGPANDAESISNTEYFAALMTALES
TDATHTHEILQLLSMVLPEVHEAVLRTKFDAVAHCLVRVMNDAQSNSDVASLKSGLVCLG
LVLQALEPTPSVWSHPTVLKTFHVLLALATDPQPKIRKTAQISIVKILEVHADAHCDALS
THIASFAENILASAVAKDQTKVLQLVGFLASALPLLPAKVVTSLTEALFKLLGANQKTLS
LVTLQALDALVSAPQSQVSAACLYGTLNTVLQMDANVHDKDVAICLIHITCRSLARLQPL
HAAHAQELLPRVVVAMCTYFESQHVQVHRKTAECLNVALQATLNLSSAAPRVLFSLESLL
NLRYQHAWSSIFVLLSSLVSFFGEAASPSFDGVFKTTVELYEAMDAMPQASDEMRKAFTR
FMVASTIALGAERMVAVVPLQNGAGIVEERTWLIPVVRDAVKQIPSRLEFFATHILNLAK
NCEAVARADSTTPLESKRMQARTMQLWSLFPSFCTKPTDLSASFKKIAKTLANAMSDKRY
PELQLLVCQGLQALIKAANRDDVATSAADQMALSKFAARFIPLLITIVEGLDVEVESERL
PTLTDTIGGYAKLAEPAFIQSVFKQLMQTLLETTTQYKRSDPKAPATLGLQAQAHFHMSI
AMALIPIIDGSQVELLYRVVKPYLLDDTDPIMQKRSYSVLVQLCEHHPAFATSPDKLTDM
IESLSESLLTCSVPAKKMRLRALNQIVSAMERTQHDDISFIPGLVGEIMLCTKEANAKAR
EAAFELLLAMARLVESKHSQPGAGLMDFLQMVLGGLAARTPHMRSASVLCMSRLVFEFGR
TEDAIRSAMPDLMRTVLMLLHEKAREVIKSVIGFMKLGIAILSKDALVEFLPSIIEGLLK
WIGEAKQRFRAKTRTIMMKLCRKYGYEYIASLVPDGDKKLITHIRKTKEREDRQKDKKHE
SHSGSKAQSFEEFMQDSDDDDSDREDVKPTKSSAKSSAANNMKVGKSYIKENAEDEIVDF
LDNSAFKNIVNSRKTKKADRDDEDFEFSKDGRLIIPGEPDADDDVAMESDDEDVVRRDVQ
KQLEQMGLSKKRKIEAVAGQEYKAKKAGGDIKKKGKLEPYAFIPLDPKLMAKRNKRTAVN
RFEKVGKQKHKK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcttctcggagctgcggcgccatgccggcgggaaccacgcgcccaaagtcaag
ctcaacattgtcttggctgcgatcacggacgtgatcctcgagcgtcgtggcccggccaac
gacgccgagtcgatctccaacaccgagtactttgccgcgctcatgacggcgctcgagagc
acagacgccactcacacacacgagatcctccagctcctcagcatggtgctgcccgaggtg
cacgaagccgtgttgcgcaccaagtttgatgcagtcgcgcactgcctggtccgcgtcatg
aacgacgcgcaatccaactcggacgtggcctcgctcaagtcgggcttggtgtgcctcggc
ctcgtcttgcaggcgctcgagccgacgccgagcgtgtggagccacccgacggtgctcaag
acgttccacgtgctcctcgccctcgcgacagacccgcagcccaagatccgcaagacggcg
cagatctcgatcgtcaagatcctcgaagtccacgccgacgcgcactgcgacgcgctctcg
acgcacattgcgagctttgccgaaaacatcctcgcgtccgccgtcgccaaggaccagacc
aaggtgctccagctcgtcggcttcctcgcgagcgcgctcccgctcttgccggccaaggtc
gtgacgagcctcaccgaggcgctcttcaagctgcttggcgcgaaccagaagacgctgtcg
ttggtcacgctgcaggcgctcgacgcactcgtgtcggcgccgcagtcccaggtgtcggcg
gcgtgcctctacggcacgctcaacacggtgctccagatggacgccaacgtgcacgacaag
gacgtggccatctgcctcatccacatcacgtgccggtcgctcgcgcgtctccagccgctc
cacgcggcgcatgcgcaggagctcctcccgcgtgtcgtcgttgccatgtgcacgtacttt
gaatctcagcacgtccaagtccaccgcaagacggccgagtgcctcaacgtcgcgctccaa
gcgacgctcaacttgtcgtcggccgcgccgcgcgtgctcttctcgctcgagagcctcctc
aacttgcgctaccagcacgcatggtcgtcgatctttgtcttgctctcgtcgctcgtgtcc
ttctttggcgaagccgcgagtccgagctttgacggtgtcttcaagacgacggttgagctc
tacgaggccatggatgcgatgccgcaagcctccgacgagatgcgcaaggcgttcacccgc
ttcatggttgcttcgacgatcgctctcggtgccgagcgcatggtggcggtcgtgccgctc
cagaacggtgccggcatcgtcgaagagcgtacgtggctgatcccggtcgtccgtgacgcg
gtcaagcagatcccgtcgcgcctcgagtttttcgcgacgcacattttgaacctggccaag
aactgcgaggcggtcgcgcgcgcggactcgacgacgccgctcgagtcgaagcgcatgcaa
gctcgcacgatgcagctctggagcctcttccccagcttttgcaccaagccgaccgatttg
agcgcgagcttcaagaagatcgccaagacgctcgcgaatgccatgtcggacaagcggtac
ccggagctccagctgctcgtgtgccagggtctccaggcgctcatcaaggccgccaaccgc
gacgatgtggctacctcggcggccgaccagatggcgctctccaagtttgccgctcgcttc
atcccgctcctcatcacgatcgtcgaggggttggatgttgaagtcgagtcggagcgtctt
cctacgttgactgacacgatcggtggctacgccaagctcgccgagccggcctttattcaa
agcgtcttcaagcagctcatgcaaacgctgctggagacgacgacgcagtacaagcgcagc
gacccgaaggcacccgcgacgctcggcctccaagcccaagcgcacttccacatgagcatt
gcgatggcgttgatcccgatcattgacggcagccaggtcgagctcctctaccgcgtcgtc
aagccgtaccttctcgacgataccgacccgatcatgcagaagcggtcgtactcggtgctc
gtccagctctgcgaacaccacccggcgtttgcgacgtcgcccgacaagctcaccgacatg
atcgagtcgctctccgagtcgctcctcacgtgctcggtgccggccaagaagatgcgcctc
cgcgcgctcaaccagatcgtctcagccatggagcgcacgcagcacgacgacattagcttc
atcccgggcctcgtcggcgagatcatgctctgcacgaaggaggcgaacgcgaaggcgcgc
gaagcagccttcgagctcctcctcgccatggcgcgcctcgtcgagtccaagcacagccag
cccggcgcggggctcatggactttctccagatggtactcggcggtctcgcggcccgcacc
ccgcacatgcggtcggcgtccgtcctctgcatgtcgcgcctcgtctttgagtttggccgc
acggaagacgcgatccggagcgcgatgcccgacctcatgcgcacggtgctcatgctcctc
cacgagaaggcgcgcgaggtcatcaagtcggtcattggctttatgaagcttggcattgcg
atcctctccaaggacgcacttgttgagtttttaccgtcgatcattgagggccttctcaag
tggattggtgaggccaagcagcgcttccgcgccaagacgcgcacgatcatgatgaagctc
tgccgcaagtacggctacgagtacattgcgtcgctcgtcccggacggcgacaagaagctt
atcacgcacatccgcaagaccaaggagcgcgaggaccgccagaaggacaagaagcacgag
agccatagcggtagcaaggcgcagtcgtttgaagagtttatgcaagactcggacgacgac
gacagcgaccgcgaagacgtcaagccgaccaagtcgtcggccaagtcgtccgctgccaac
aacatgaaggtcggcaagagctacatcaaggagaacgcggaagacgagatcgtcgacttt
ctcgacaactcggccttcaagaacattgtcaactcgcgcaagacgaagaaggccgatcgc
gacgacgaagactttgagttttcgaaagatggtcgcttgatcattcccggggagcccgat
gcggacgacgacgtggccatggagtcggacgacgaagatgtcgtccgtcgcgacgtgcag
aagcaactcgagcagatgggcttgagcaagaagcgcaagatcgaagcggtcgcgggccaa
gagtacaaggccaagaaggcgggcggtgacatcaagaagaagggcaagctcgagccatat
gcgttcattccgctcgacccgaagctcatggcgaagcgcaacaagcgcacggccgtcaac
cggttcgaaaaggtcggcaagcaaaagcacaagaagtag
DBGET
integrated database retrieval system