Saprolegnia parasitica: SPRG_05695
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Entry
SPRG_05695 CDS
T04137
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_05695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_05695
03041 Spliceosome [BR:
spar03041
]
SPRG_05695
03032 DNA replication proteins [BR:
spar03032
]
SPRG_05695
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SPRG_05695
Spliceosome [BR:
spar03041
]
Complex A
U1 snRNP components
Sm proteins
SPRG_05695
U2 snRNP components
SPRG_05695
Complex B
U1 snRNP components
SPRG_05695
U4/U6.U5 tri-snRNP components
SPRG_05695
Complex C
U2 snRNP components
SPRG_05695
DNA replication proteins [BR:
spar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SPRG_05695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
24128083
NCBI-ProteinID:
XP_012200374
UniProt:
A0A067CDC5
LinkDB
All DBs
Position
Unknown
AA seq
83 aa
AA seq
DB search
MSGLILNPKPFLAGLTGKAVVVKLKWGMEYQGDLVSVDSYMNLQLANTDEFVGGAKTGHL
GEVLIRCNNVLYVRGAPEDAKQG
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctgatcctcaacccgaagcccttcctcgccggcctcacgggcaaggccgtc
gttgtcaagctcaagtggggcatggagtaccagggcgacctggtctcggtcgactcgtac
atgaacctccagctcgccaacacggacgagtttgtcggtggcgccaagacgggccacctc
ggcgaagtgctcatccgctgcaacaatgtgctctatgtgcggggcgcgcccgaagacgcc
aagcaaggctag
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integrated database retrieval system
