KEGG   Saprolegnia parasitica: SPRG_05777
Entry
SPRG_05777        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
spar  Saprolegnia parasitica
Pathway
spar03020  RNA polymerase
spar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPRG_05777
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_05777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_05777
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_05777
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SPRG_05777
  RNA polymerase III system
   RNA polymerase III
     SPRG_05777
  RNA polymerase I system
   RNA polymerase I
     SPRG_05777
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPRG_05777
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 24128159
NCBI-ProteinID: XP_012200450
UniProt: A0A067CQU5
LinkDB
Position
Unknown
AA seq 116 aa
MDDEYDHDAAMDDMEDVNEEQEEMENFDEMEDGAEHENGVALLDESEKQPNAHRITTRYM
TQISMNAPVMVDIEGETDPLKIAMKELSQRKIPIIIRRYLPDGSYEDWSIDELIIE
NT seq 351 nt   +upstreamnt  +downstreamnt
atggacgacgagtacgaccacgacgccgccatggacgacatggaggacgtgaacgaggag
caggaagagatggagaacttcgacgagatggaagacggcgccgagcatgagaacggcgtc
gcgctcctcgacgagtcggagaagcagcccaacgcccaccgcatcacgacgcgctacatg
acccaaatcagcatgaacgcgcccgtcatggtcgacattgaaggcgagacggacccgctc
aagattgccatgaaggagctcagccagcgcaagatcccgatcatcatccgccggtacctc
ccggatggctcgtacgaggactggtccattgacgaactcattattgaataa

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