Saprolegnia parasitica: SPRG_05942
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Entry
SPRG_05942 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
spar
Saprolegnia parasitica
Pathway
spar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPRG_05942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_05942
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
SPRG_05942
Prokaryotic type
Archaeal type
TFE
SPRG_05942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
POLR3C_WHD
Motif
Other DBs
NCBI-GeneID:
24128315
NCBI-ProteinID:
XP_012199907
UniProt:
A0A067CJM7
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MAALVEKLVRLIARAFYSDEHIVVLEALLRERFLKDDEMGNAVNLQTKQVRKICHDLEKE
DMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCS
NDDCGREYTALEAQLLLTPDVYEFHCGHCNFKLVECDNNEKLQTIKGLLAKFKVQLNRQE
DMHDGIYECLARISEWQNSGQALPSNLPSENRAAGIGGASTAKMNGRNGGGGGGGGGGPG
GNRGGDEKTSGLYGKFEDAKIVIDIAENANQDEYSTLNPNKPKEEIKLQTANSGPAMPEF
IMGSKMSDNMAAKYKKNAIPEVLATSASAASLNAGVSMGLSSREAEMREEAFREAYKREM
ERYNEINAAEVVWDSVSGNKWVDAASKEDDDLEDMEWEWCDSTQDDTFDDEQQTVMVSVN
GCPTPIVKLTDDDLMRMTRDEYAAFYQLCRSMMA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggtcgagaagctcgtccggctcatcgctcgggccttctactcggacgag
catatcgtcgttcttgaggctctcctgcgcgagcgcttcctaaaggacgacgagatgggc
aatgcagtgaacctccagacgaagcaagtgcgcaagatctgccatgatctggagaaggaa
gacatgatctctcgcgaggagctcaatgacaagaagctcgggggcgcgtccaaggcaacg
tattggtacatcgactacaagcactttgttaacgtcgtgcgctaccgcctgtacatcatc
gcgcaccacctgaaggagagcgagcagctcgagattgagcggcagacctttcggtgctcc
aacgatgactgtggacgcgaatacacagccctcgaagcgcagcttctccttacacccgac
gtctacgagttccactgcggccactgcaacttcaagctcgtcgagtgcgacaacaacgag
aagctccaaacgatcaaagggcttctggccaagtttaaagtccagctcaaccgccaagaa
gacatgcacgatggcatctacgagtgcttggcgcgtatcagcgagtggcaaaactcgggc
caggcccttccaagcaatctgccgagcgagaaccgtgccgctggtatcggtggggcgtcc
acagccaagatgaacggccgcaacggtggtggcggcggcggtggcggcggtggtcctggc
ggcaaccgtggtggcgatgaaaagacctcgggcctctacggcaagtttgaggacgccaag
atcgtgatcgacattgctgagaacgccaaccaagacgagtactcgacgctgaaccccaac
aagccgaaggaagaaatcaagctccaaacggccaactcggggccagcgatgcccgagttt
atcatgggcagcaagatgagcgacaacatggcggccaagtacaagaagaacgcaattccc
gaggtcctagcaaccagtgcgtccgccgcgagcctcaacgccggtgtcagtatgggcctc
tcgtcgcgcgaggcggaaatgcgcgaggaggccttccgtgaggcatacaagcgtgaaatg
gagcggtacaacgagatcaacgcggccgaggtcgtctgggactcggtgagtggcaacaag
tgggttgacgcggcctccaaagaagacgacgacctcgaagacatggagtgggagtggtgc
gactcgacgcaagacgacacattcgacgacgagcagcaaaccgtcatggtgtctgtcaac
ggctgtccgacaccgatcgtgaagctcacggacgacgacctcatgcgcatgacgcgcgac
gagtatgcggccttttaccagctctgccgctccatgatggcctaa
DBGET
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