KEGG   Saprolegnia parasitica: SPRG_05942
Entry
SPRG_05942        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
spar  Saprolegnia parasitica
Pathway
spar03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SPRG_05942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_05942
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     SPRG_05942
 Prokaryotic type
  Archaeal type
    TFE
     SPRG_05942
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C POLR3C_WHD
Other DBs
NCBI-GeneID: 24128315
NCBI-ProteinID: XP_012199907
UniProt: A0A067CJM7
LinkDB
Position
Unknown
AA seq 454 aa
MAALVEKLVRLIARAFYSDEHIVVLEALLRERFLKDDEMGNAVNLQTKQVRKICHDLEKE
DMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCS
NDDCGREYTALEAQLLLTPDVYEFHCGHCNFKLVECDNNEKLQTIKGLLAKFKVQLNRQE
DMHDGIYECLARISEWQNSGQALPSNLPSENRAAGIGGASTAKMNGRNGGGGGGGGGGPG
GNRGGDEKTSGLYGKFEDAKIVIDIAENANQDEYSTLNPNKPKEEIKLQTANSGPAMPEF
IMGSKMSDNMAAKYKKNAIPEVLATSASAASLNAGVSMGLSSREAEMREEAFREAYKREM
ERYNEINAAEVVWDSVSGNKWVDAASKEDDDLEDMEWEWCDSTQDDTFDDEQQTVMVSVN
GCPTPIVKLTDDDLMRMTRDEYAAFYQLCRSMMA
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcggcgctggtcgagaagctcgtccggctcatcgctcgggccttctactcggacgag
catatcgtcgttcttgaggctctcctgcgcgagcgcttcctaaaggacgacgagatgggc
aatgcagtgaacctccagacgaagcaagtgcgcaagatctgccatgatctggagaaggaa
gacatgatctctcgcgaggagctcaatgacaagaagctcgggggcgcgtccaaggcaacg
tattggtacatcgactacaagcactttgttaacgtcgtgcgctaccgcctgtacatcatc
gcgcaccacctgaaggagagcgagcagctcgagattgagcggcagacctttcggtgctcc
aacgatgactgtggacgcgaatacacagccctcgaagcgcagcttctccttacacccgac
gtctacgagttccactgcggccactgcaacttcaagctcgtcgagtgcgacaacaacgag
aagctccaaacgatcaaagggcttctggccaagtttaaagtccagctcaaccgccaagaa
gacatgcacgatggcatctacgagtgcttggcgcgtatcagcgagtggcaaaactcgggc
caggcccttccaagcaatctgccgagcgagaaccgtgccgctggtatcggtggggcgtcc
acagccaagatgaacggccgcaacggtggtggcggcggcggtggcggcggtggtcctggc
ggcaaccgtggtggcgatgaaaagacctcgggcctctacggcaagtttgaggacgccaag
atcgtgatcgacattgctgagaacgccaaccaagacgagtactcgacgctgaaccccaac
aagccgaaggaagaaatcaagctccaaacggccaactcggggccagcgatgcccgagttt
atcatgggcagcaagatgagcgacaacatggcggccaagtacaagaagaacgcaattccc
gaggtcctagcaaccagtgcgtccgccgcgagcctcaacgccggtgtcagtatgggcctc
tcgtcgcgcgaggcggaaatgcgcgaggaggccttccgtgaggcatacaagcgtgaaatg
gagcggtacaacgagatcaacgcggccgaggtcgtctgggactcggtgagtggcaacaag
tgggttgacgcggcctccaaagaagacgacgacctcgaagacatggagtgggagtggtgc
gactcgacgcaagacgacacattcgacgacgagcagcaaaccgtcatggtgtctgtcaac
ggctgtccgacaccgatcgtgaagctcacggacgacgacctcatgcgcatgacgcgcgac
gagtatgcggccttttaccagctctgccgctccatgatggcctaa

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