Saprolegnia parasitica: SPRG_05953
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Entry
SPRG_05953 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_05953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_05953
Spliceosome [BR:
spar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SPRG_05953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF7373
Motif
Other DBs
NCBI-GeneID:
24128326
NCBI-ProteinID:
XP_012199918
UniProt:
A0A067CSB0
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MDASGATDQPRKKRSRFSEAVEPAPSAAPVDTAKRPKIDPAALAKAAAAAISKQLPKHLE
STVGDAERKKAALERLARQQHLIKSMQAQIGHVQAAVSSTTNTLIGRGSFLPAPLLLDNE
GRHIDADGNVIEEKVAPVATLKANLGAGAEAEKAKQKKPVNPYLSFRSVDHRDRVDTVDP
RLKTRNRDTRGAKNFTFVKQGTYIKQGEQLRAREAKKMLAGFSSGRNPNAYVKESVVDLG
EDEAGDAAATATSLEVPMKLEEPVPEVEWWDIPYLPKEKQEMLDKNGFLKGRGRSDVIDY
VADMKLKFAGTAHLIEHPARIRVGRKEAPVTLPLMLTKAERKRIRRTARAERLKEVQDKI
ALGLLPPPEPKVKLSNMMRVLQDQAVSDPSAIERKVRAQVAQREKNHEMRNLARKLTPEE
RREKIMRKLKADASGDLHVALFRAPDLSHPQHQFKVDVNAQQLHLTGAVVTVKENPELNL
VVVEGGPKSIKSYIKLMCRRIDWAKRPPPRAPPAESLDANDVPLPDNEEEEATVAHESMS
DALQPKRAKKKAKCYLVWKGIVAKRAFASFKFQECKTASTARKVLEAKHVEQYWDMIESY
NPLLENPHLADENVHDDATTTNKPAT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacgccagcggagcgacggaccagccgcggaagaagcgcagccggttcagcgaggcc
gtggagcctgcgccgtctgctgcgcccgttgatactgcgaagcgccccaagatcgatccg
gcggcgctggcgaaagcggccgcggccgcgatctccaagcagttgccaaagcatttggaa
tcgaccgtgggcgacgccgagcgcaagaaggccgcgctcgagcgccttgctcggcagcag
cacttgatcaagtccatgcaagctcagattggccacgtccaagccgcggtgagcagcacg
accaacacgttgattgggcgcggttcgttcttgccggcgccgctcttgctcgacaacgag
ggccgccacattgacgccgacggcaacgtgattgaagaaaaagtggcgcctgtcgcgact
ctcaaggccaacttgggcgccggcgccgaggccgagaaggccaagcaaaagaagccggtg
aacccatacctctcgtttcgcagcgtcgaccatagagaccgcgtcgacacggtcgacccg
cgcttgaagacacgcaaccgtgacacgcgcggagccaagaacttcacctttgtcaagcaa
ggcacgtacatcaagcagggcgagcagctccgtgcgcgcgaggccaagaagatgctggcg
ggcttctcgtccggccgcaacccgaacgcgtatgtcaaggagtcggtcgtggacctcggc
gaggacgaggccggtgacgcggccgcgaccgccaccagcctcgaagtgcccatgaaactc
gaagagccggtgcccgaggtcgagtggtgggacattccgtacctgccgaaagagaagcaa
gaaatgctcgacaagaacgggtttctcaagggccgtggtcgctccgacgtcatcgactac
gtggcggatatgaagctcaagtttgctggcacggcgcacttgattgagcacccggcgcgc
atccgcgtcggtcgaaaggaggcgcccgtgacgctgccgctcatgctcacgaaagcggag
cgcaagcgaattcgtcgcacggcccgtgccgagcggctcaaggaggtccaagacaagatc
gcgctgggtctcttgccgccgcccgagccgaaagtcaaactgagtaacatgatgcgcgtg
ctccaggaccaagcggtctcggacccgtcggcaatcgagcgaaaagtgcgcgctcaagtc
gcgcagcgcgagaagaaccacgagatgcgcaacttggcgcgcaagctcacaccggaggag
cgccgcgagaagatcatgcgcaagctcaaggccgacgcatccggcgacctccacgtcgcc
ctcttccgggcgcccgacctctcgcatccgcagcaccagttcaaggtggacgtgaacgcg
cagcagctgcacctcacgggtgccgttgtgaccgtcaaggagaacccggagctcaacctc
gttgtcgtcgagggcgggcccaagtcgatcaagagctacatcaagctcatgtgccgacgc
atcgactgggccaagcgcccgcccccccgcgcgccgccggcagaatcgctggacgccaac
gacgtcccgttacccgacaacgaggaagaggaggcgacagttgcgcacgagagtatgtcg
gacgcgctgcagcccaaacgagccaagaagaaggccaagtgctacttggtgtggaagggt
attgtggccaagcgggcgtttgcgtcgttcaagtttcaagagtgcaaaacggcctcgacc
gcgcgcaaggtgctcgaagccaagcacgtggagcagtactgggacatgattgagagctac
aacccgctgctggagaacccgcacctggccgacgagaacgttcacgacgacgcgacgacg
accaataagccagccacttaa
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