Saprolegnia parasitica: SPRG_06133
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Entry
SPRG_06133 CDS
T04137
Name
(RefSeq) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_06133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_06133
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_06133
Enzymes [BR:
spar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPRG_06133
Messenger RNA biogenesis [BR:
spar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPRG_06133
Transfer RNA biogenesis [BR:
spar03016
]
Prokaryotic type
tRNA degradation factors
SPRG_06133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
KH_2
S1
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
24128496
NCBI-ProteinID:
XP_012200246
UniProt:
A0A067CF03
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MLSVSSRRSLALAKQLQPRVLAGRSKVFEQHQRTFFGLGDFFKSLVGNDEPKKKLLEAPK
EPKAKAPKAPKIDVVAEPVYVPRPQEPVQYAVGKYATLADGSVMARWGDSMLLTTVVSEV
SANHEKDFLPLMVDYREKYSATGTIPGGVKRREMMGTDAEILKSRIVDRIVRPLFPKGYC
NETQIIATVQSYDVDHDPVVLAVNSASAALTTSNIPWNGPIGCVRVCSVDGRLVCNPTAD
EKARATLDVLYAATATRTVMIEAEGLEISEAAMQEALRFAHEHVQPVIAEQEALPAKAKR
AFTPLVVPDDLAAAAEALVPELRTRLRSLQAPTTKSQRQVLENDCYYFVKQQLYKTHAEL
LLANKPLFSMVSHDLVQGALRANLLDGHRVDGRSTDQVRPLTMETGLLPLVHGSSVFSRG
DTQALCTVTLGHVDQGLKVRSAIRDNDDYELKNAMLHYEFPPYCVNETGKIGGINRRMLG
HGALAEKAVVPLLPSVLDFPFTIRMTSETMGSDGSSSMASVCGVSMALLDAGVPIKSPVA
GISVGLVTPGDLYDGTAPINEYTLLTDILGSEDHYGDMDFKIAGSKDGITAIQLDVKLPG
VPLDILCEGISKAHVARMDILSQMNSVLAEARPINPIKVASSTIVHIDPAMRGALIGTGG
SNIREIEAATNCTISCKDSDGVVEIFGKGDENIELAKAMIAESTFMFRRGQRVEVVVQAI
MDFGCVVVPKFAYGKDSANDKSKQGFIHISEMAHSPVRKVSDVLMTGQTLEAWCIFAEKD
SAKLSIKALLHPVTGAALGDAEAMQFTKEREDERRKQRSVSGFANSPRSTHANPSARRPR
TNNNSHRHHSNSNNSN
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgtctcgagtcggcgctctcttgcgctcgccaagcagctccagccgcgcgtg
ctggctggccgcagcaaggtctttgagcagcaccagcgcacgttctttggcctcggcgac
ttcttcaagtcgctcgttggcaacgacgagccgaagaagaagcttctggaagcgcccaag
gagcccaaggcaaaggcgcccaaggcgcccaagatcgacgtcgtcgccgagcccgtgtac
gtgccccgcccgcaagagcccgtgcagtacgcggtcggcaagtacgcgacccttgccgat
ggcagcgtcatggcccgctggggcgactcgatgctgctgacgacggtcgtgagcgaagtg
tcggccaaccacgagaaggactttctcccgctcatggtcgactaccgcgaaaagtactcg
gcgacaggcacgatcccgggcggcgtcaagcgccgcgaaatgatgggcaccgacgccgag
atcctcaagagccgtatcgtcgatcgcattgtccgcccgctcttccccaagggctactgc
aacgagacgcagatcattgcgaccgtccagtcctacgacgtggaccacgacccggtcgtg
ctcgctgtcaacagtgcatccgcggcgctcaccacgtccaacattccgtggaacggtccc
atcggctgcgtccgcgtctgcagcgtcgatggccgcctcgtgtgcaacccgaccgccgac
gagaaggcgcgcgcaacgctcgacgtgctgtacgcagcgacggcgacgcgcaccgtcatg
attgaagctgagggcctggagatctccgaggccgcgatgcaagaggcgctccgctttgcc
cacgagcacgtgcagcccgtcatcgccgagcaggaggcgctgcctgccaaggccaagcgc
gcgttcacgcctctggtcgtgccggacgatctcgccgcggccgcggaagcgctcgtgccc
gagctgcgaacgcgcttgcgcagcctgcaagcgccgacgacgaaatcgcagcgccaagtg
ctcgagaacgactgctactactttgtcaagcagcagctctacaagacgcacgccgagctg
ctcctggccaacaagccgctcttttcgatggtgtcgcacgacctggtgcaaggtgcactg
cgcgccaacttgctcgacggccatcgcgtggacggccgaagcaccgaccaagtgcgcccg
ctcaccatggagacgggcctcctcccgctcgtgcacgggtcgtcggtcttttcgcgcggc
gacacgcaggcgctgtgtacggtaacgcttggccacgtcgatcaaggcctcaaggtgcgg
tcggcgatccgggacaacgacgactacgagctcaagaacgcgatgctgcactacgagttc
ccgccgtactgcgtcaacgagacgggcaagattggcggcatcaaccgccgcatgcttggc
catggtgccctggcggagaaggcggtcgtgccgctcttgccgtccgttctggactttccc
tttacgatccgcatgacgtccgagacgatgggctcggacggctcgtcgtcgatggcgagt
gtctgcggcgtctcgatggcgctcctcgatgccggtgtcccgatcaagtcgcccgtggcc
ggcatttccgtcgggcttgtgacgccgggggacctctatgacggcacggcgccgatcaac
gagtacacgctgctgacggacattcttggcagcgaagaccactacggcgacatggacttt
aagattgcgggctcgaaggacggcatcacggcgatccagctcgacgtcaagctgccgggc
gtgcccctcgacattttgtgcgagggcatttccaaggcgcacgtcgcgcgcatggacatt
ctgtcgcaaatgaacagcgtgctggccgaggcgcggcccatcaacccaatcaaggtggcg
tcgtcgacgatcgtgcacattgatccagcgatgcgcggcgcactcattggcacgggcggc
agcaacattcgcgagatcgaagcagcgaccaactgcacgatttcgtgcaaggactcggac
ggcgtcgtcgagatctttggcaagggcgacgagaacattgagctcgccaaggccatgatt
gccgagtcgacgttcatgttccgtcgcggccagcgggtcgaggtggtcgtgcaggccatc
atggactttggctgcgtcgtcgtgcccaagtttgcgtacggcaaggactcggcgaacgac
aagtccaagcaaggctttatccacatctcggagatggcgcactcgcccgtgcgcaaggtc
tcggacgtgctcatgacgggccagacgctcgaggcgtggtgcatattcgccgagaaggac
tcggccaagctctcgatcaaggcgctcttgcaccccgtgacgggcgcggccttgggcgac
gcggaagccatgcagtttaccaaggagcgcgaagacgagcgccgcaagcagcggtcggtg
tcgggcttcgccaacagcccgcgcagcacgcacgccaacccgtcggcgcgccgtccccgc
accaacaacaactcgcaccgacaccactcgaactcgaacaacagcaactaa
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