Saprolegnia parasitica: SPRG_06223
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Entry
SPRG_06223 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spar
Saprolegnia parasitica
Pathway
spar04142
Lysosome biogenesis
spar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
SPRG_06223
04148 Efferocytosis
SPRG_06223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spar04131
]
SPRG_06223
Membrane trafficking [BR:
spar04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
SPRG_06223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
zf-Vps39_C
Vps39_1
Beta-prop_WDR36-Utp21_1st
VPS18_solenoid_2nd
MED33_TPR-like_mid
Beta-prop_LRRK2
Beta-prop_NOL10_N
VPS3_N
Motif
Other DBs
NCBI-GeneID:
24128582
NCBI-ProteinID:
XP_012201002
UniProt:
A0A067CGA9
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MMEGKRVALQTSVVAEYAGRVECVVHYSMRVLVGTADGKLVLYDTRKDTSRPIASHELPH
RGRVQQILVVPHIRMVLVLANNTVTVHAATDLELLASDLHLAKDVVHLCVNQRGPPHFRI
CASSGAKLQLFQFEAKEKRYRFLRELPIARAPESVAWYRNKLVVGSRDGYVLMNDKTGET
APINLSMGGSGTAAIKLLPNEEIVVAAMDTVGVFITFTGDPVERNSISWSKPPSAIEFTS
PYIVAMLPSKGVEIHSLADASLVQFLPIPRIAAIFSNGMKWDMDPRPVGDSEDVVVVAQL
NPSGTTSILKIEQTPMDQQVTELLERGKIEDASDLMKKSLASLPSDKQKSRMRRFHRQVA
IALLRRCEFDSAVEFVYRSGMDPREWLSFFPELCAPSFAYEPTVLTPDVLPRGNSASPDM
KSVLAVLLKDHAHVMAPEIASAGATKLHQQATKALMKSLEMIKKHASRDRSASKESPFAT
PNRSRSGSRDRAFSSRSNSIASVPKDLQRAEAVDTALLRLFILFQRFPDITTLLTSLDAQ
GDGAHVDMGSSQSLLMRHHLYYELGLLFERHGRLLDALDVYARMGSGEYVQSTVDDSASG
VLATVELLRTLDDPALVYTHSKWVLQAAPQEGLRIFTSRKPGLPKLVVADVAAHLKAHSS
DASVAAKYLEIMADESGGGKGIALDIENPHHTRLAQEYLDEVLKLIANGDVPSKSNPGRE
PGALGVARKRLLKFLKAPESAYDVSALMSKVKASPLRAEFVVLCGRGGFHDEALHSMLAM
SDDLAGAEAYCDKYGSSGRGGTNKALLLLLQLCFADLDNVDRVEFAHLVMARHAKQLPGI
TALELIPPSTPLAKVTDFLGQLLPHSAHQVRDQMLARNLSNIYNLQVQCDRVERISESVE
IDAKTICGVCKKRIDTTIFAVYPNGSLVHFSCGANASMEVDPVTGMDFGN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggcaagcgcgtcgcgttgcagacgtcggtggtcgccgagtacgccggtcgc
gtcgagtgcgtcgtgcactactccatgcgcgtgcttgtcggtacggcggacgggaagctg
gtcttgtacgacacgcgcaaggacacgagccgcccgatcgcgtcgcacgagctgccccat
cgcggccgcgtgcagcaaatcctggtcgtcccgcacatccgcatggtgctcgtccttgcg
aacaacacggtcacggtccacgcggccacggacctcgagctcctcgcgtcggacctgcac
ctcgccaaggacgtcgtgcacctctgcgtcaaccagcgtgggccgccccactttcgtatc
tgcgcctcgtccggcgccaagctccagctgttccagttcgaggcgaaggagaagcggtac
cggtttctgcgcgaattgccgattgcgagagcgcccgagagcgtcgcgtggtaccgcaac
aagctcgtcgtcggcagccgcgatggctacgtgctcatgaacgacaagacgggcgagacg
gcgccgatcaacttgagcatgggtggttccggcaccgcggccatcaagctccttccgaac
gaagagattgtcgtcgccgcgatggacacggtcggcgtcttcatcacgtttacgggcgac
ccggtcgagcgcaactcgatctcgtggtccaagccgccgtccgcgattgaattcacatca
ccgtacattgtcgcgatgcttccgtccaagggcgtcgagatccactcgctcgccgacgcg
tcgctcgtccagttcctcccgattccgcgcattgcggccatctttagcaacggtatgaag
tgggacatggatccgcggcctgttggtgactcggaggacgttgtcgtcgtcgcccagctc
aacccgtcggggacgacctcgatcctcaagatcgagcagaccccaatggaccagcaagtg
acggagctcctcgagcgcggcaagatcgaggacgcgtcggacctcatgaagaagagcctc
gcgtcgcttccgagtgacaagcagaagagccgcatgcgccgcttccaccgccaagtcgcg
atcgccctcctccgccgctgcgagtttgacagcgcggtcgagtttgtctatcggtccggt
atggacccgcgcgagtggctctcgttctttccggagctctgcgcgccgagctttgcgtac
gagccgacggtgctgacgccggacgtcttgccgcgcggcaatagcgcaagccctgatatg
aagtcggtcctcgcagtactgcttaaagaccacgcgcacgtgatggcgcccgagattgcg
tcggccggcgcgaccaagctgcaccagcaggcgaccaaggcgctcatgaagtcgctcgag
atgatcaaaaaacatgccagccgggaccgcagcgcgtcgaaggagtcgccctttgccacg
cccaatcggtcccgctcgggcagccgcgaccgggcgttctcgtcgcgctccaattcgatc
gcgtcggtgccaaaggatctgcagcgcgccgaggctgtggacacggcgctgctgcgtttg
ttcattctttttcagcgctttcccgacattacgacgctcctcacgtcgctggatgcgcag
ggcgacggcgcccacgtcgacatgggctcgtcccagagcctcctcatgcgtcatcatttg
tactatgagctcggcctcttgtttgagcgccacggccgactcctcgacgcactggacgtc
tacgcgcgcatgggctcgggcgagtacgttcagagcacggtcgatgacagcgcgtccggg
gttctcgcgaccgtcgagcttttgcgaacgctcgacgaccccgcgctcgtctatacccac
tcgaaatgggtgctccaggccgcgccgcaagaggggctgcgcattttcacgagccgcaag
ccgggcctacccaagctcgtcgtggccgatgtggctgcgcaccttaaggcgcactcgtcg
gacgcgtctgtcgcggcaaagtacctcgaaatcatggccgacgagtcgggcggtggcaag
ggcatcgcgctcgacattgaaaacccccaccacacgcgcctcgcgcaagagtacctcgat
gaagtgctcaagctcatcgccaacggcgacgtgccgtccaagtcgaatcctggccgcgaa
ccgggcgcgttgggcgtcgcgcgcaagcgtttgctcaagtttctaaaagccccggaatcc
gcgtacgacgtctcggcgctcatgtcgaaagtcaaggcgtcgccgctgcgggccgagttt
gtcgtgctctgtggccgcggcggcttccacgacgaagcgctgcactcgatgctggcgatg
agcgacgacctcgccggcgccgaagcctactgcgacaagtacgggtcgtcgggccgcggt
ggcaccaacaaggcgctcttgctgctgttgcagctgtgctttgcagacctcgacaacgtc
gaccgtgtcgagtttgcccacctcgtcatggctcgccacgccaagcagctgccgggtatc
acggcgctggagctcattccgccgtcgacgccgctggccaaggtgacggatttcctcggg
cagcttctgccgcacagcgcgcaccaagtccgcgatcaaatgctcgcgcggaacctctcc
aacatttacaacctccaagtgcagtgcgaccgcgtcgagcggatttccgagtcggtcgaa
attgacgccaagacgatctgcggcgtgtgcaagaagcgcattgacacgaccatctttgcc
gtgtaccccaacggatcgctcgtgcactttagctgcggcgccaacgcgagtatggaagtc
gaccccgtcaccggcatggactttggcaactaa
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integrated database retrieval system
