Saprolegnia parasitica: SPRG_06286
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Entry
SPRG_06286 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_06286
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
90S particles
Other 90S particles
SPRG_06286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_C
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
RNase_II_C_S1
TPR_15
OB_RRP5
UTP6_C
SH3_3
Nop14
Motif
Other DBs
NCBI-GeneID:
24128641
NCBI-ProteinID:
XP_012201061
UniProt:
A0A067CN71
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MDVSFPRGKKPSVDDASKKRKKPEDSDVLFGKKDHAATTDAPSKKKVHKHKKTEDVPAAR
AEKAAAAHCITFKNLKAGTLIMGVIRQVNEADLVETSDELHKVVKPEGGELAARFYVGQF
VSAVVLKCSKEEKGKRIELSLRVSLINANLSAQHIAKGASLYASVQSVEDHGAIMNLGVR
GYTGFVPKKDLHAPDALPELVPGQVFFCAVNLVNEHTHTATLTTEKAVVVKTVTRGDSYT
MSTLSLGMLLNVRIDEVLANGLRVNFLTFFNGSVEYNHMSNPCQKNWADAFSKGMKGRAR
ITAIDALNKTIVLSMAPHIVHLQTPEFAENIGDIIESCAIHRIDAGIGMLVSLGGLTTTD
KLSWKDFRPAFAHISRCADFRVEKLEKHFKLDQVLPGRVVGYSLFDSVVNVTLAPAALNK
AALRLSDLAAGTVVKGKVVSVESWGILVDICDGIRGLVSAAHAPTVALKKTMSKYKVGHA
IECRVLSVDVPAKKVHLTLKKGLVSSELPPLTSYQMATPGTMAHGFITKVAEFGLVVGFY
NGVHGLVPAATLFKAGVEDIAAAYTTGQVVKACVARCDPIKMRMTLTFDTTSTVTRATAS
GVATSSSELPAGAIVDVKVIEVDESFVRVQTNDGLEGVVANAHLTDFPRAIPASVSVDDT
FSCMVLFQAKDGLLHLTKKPLLLAAKEQKTMPSRFADVTEGMAVTGFVREIRPFGVFVSF
LNNLQALAPIAFLTDRFVSSADGLFEIGDTVHCFVEKVHTEKQQFMLDFRTCDKPRVDAD
YAPALFAEHALSHGAAQPWKAHHVGHTEAAEFVSAKAYGHVCSLDDETTVIVTETDGLDW
KENQKVNVRLIDYDFEKQVFFATASSALVKAGEKKARKKALRLEANAVVDATILLTRDEY
AVVAVDSTVAVLQVASFFSPSSSCASLQLEAGQVHACRVAGHVQQNPFDDLAVLVLLASE
KKATKTKAKKTDHEHLPKYAGSDLVLGGLVTGRIVGIKEDTMELKIKCSKSAGKVNAFVS
LVDVDSNGAGAHPFDAFSTNTVVTGRIVSMVEKGANQRKPVGPENVANFRSLNVSLRSGD
QSGDVAARADWAGAGLEALEAGEMIPGVVVETAKDGVMIRLSARVLSSDIKVLETFTQSF
AVGTRVNCRVLSLDVEKKHIDLSCLAAARATNVGDVVLGRINTNVKALAAPSIMVQLGAH
AFGRVCVTEVVDTPSSLPLATLEHGAFVRAVVLSNDKHVVELSLKPSAVADPASYVALDA
ALAAKVPALGDLVTGYVATVGSGGCFVRSHRSRTARVLLRELSDDFVKEPAKMFPAGTLV
VGRVTKVENDKVELSLKASVVTEGAGGASSVTLESLSVGMNVKGTISSVQTYGVFIKIEN
STLSGLCHISEVADSKVKSLDGVFSAGDYVKAKVLKIENRRISLGLKPSYFADDESSSSE
DESSDDEDDEEEKEDVDMEAADSDDDEDEEEEKEDVDMEAADSDNDEDEDEDAEDEDEAP
KAAPYADFAWDGFSIEKSNKPADDDDDDDEANATDAVSKAKAKRMKKAAKENEDMYVAYR
ERALAAGETVPESADDFERLLAVSPLNSFLWIQYMAFHVSMTDIAAARDVAVRATTKVTF
REAQEKLNVWVAYLNLEHDHGDESSFGRVFNSALRANNPKHMYLKLIELYVRHEQADDVH
ASLKTMQKKFNTSAKVWLRSCEWAMQEGTPDVARKVLQRSMQSLPKHKHLKVLTKFALMQ
YDYGEMEHGRSMFEQILSNYAKKMDLWNVYLDREIKFGELASTRLLFERVVSMALSAKKM
KAIFKKYLTFEMDHGDEAGVAHVKELAAAYVESSSA
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgagcttcccgcgcggcaagaagccgtcggtcgacgacgcctccaagaagcgc
aagaagcccgaagactcggacgtcctcttcggcaagaaggaccatgcggcaaccaccgac
gcgccgtccaagaagaaggtccacaagcacaagaagaccgaggacgtcccggccgcgcgc
gccgagaaggccgcggccgcgcactgcatcacattcaagaacctcaaggccggcacgcta
atcatgggcgtgattcgccaggtcaacgaggccgacctcgtggaaacctcggacgaattg
cacaaggtcgtcaagcccgagggcggtgagctcgcggcccgcttctacgtcggtcagttt
gtctctgcggttgtgctcaagtgctccaaggaagagaagggcaagcgcattgaactctcg
ctccgcgtctcgctcatcaacgccaacttgagcgcccagcacattgcgaagggcgcgtcc
ctctacgcgagcgtccagagcgtcgaagaccacggcgcgatcatgaacctcggcgtccgc
ggctacacaggcttcgtgcccaagaaggatctgcacgcgccggacgcgctcccggagctc
gtgcccggccaggtcttcttctgcgccgtcaacttggtcaacgaacacacgcacacggcg
acactcacgaccgagaaggcggtcgtcgtcaagacggtcactcgtggcgactcgtatacc
atgtcgacgctctcgttgggcatgctcttgaacgtgcgtatcgacgaagtgcttgccaac
gggctgcgcgtcaactttctcacgtttttcaacgggtcggtcgagtacaaccacatgagc
aacccgtgccagaagaactgggccgatgcgtttagcaagggcatgaagggccgtgcgcgc
atcaccgcgattgacgcgctgaacaagacgatcgtgctctcgatggcgccgcacattgtg
catctgcagacgcccgagtttgccgagaacattggcgacatcattgagagctgcgcgatc
catcgcattgacgcgggcatcggcatgctcgtgagcctcggcggcctcacgaccacggac
aagctctcgtggaaggacttccgcccggcctttgcgcacatctcgcgctgcgccgacttc
cgcgtcgagaagctcgagaagcacttcaagctcgaccaagtgctgcccggccgcgtcgtc
ggctactcgctcttcgacagcgtcgtcaacgtgacgctcgcgcccgccgcgctcaacaag
gcggcgctccgcctctccgacctcgcggctggcacggtcgtgaaaggcaaggtggtcagc
gtcgagtcgtggggcatccttgttgacatttgcgacggcatccgcggcctcgtctcggct
gcccacgcgccgaccgtcgcgctcaagaagaccatgtccaagtacaaggtgggccacgcg
atcgagtgccgcgtcctcagcgtcgacgtgcccgcgaagaaggtgcacctgacgctcaag
aagggcctcgtgagctcggagctgccgccgctcacgtcgtaccagatggcgacgcccggc
acgatggcgcacggcttcatcaccaaggtggccgagtttggtctcgtcgttggcttctac
aacggcgtgcacggtctcgtcccggccgcgacactcttcaaggccggcgtcgaggacatt
gccgcggcctacaccacgggccaggtggtcaaggcttgcgtcgcccgctgcgacccgatc
aagatgcgcatgacgttgacgttcgatacgacgtcgaccgtgacgcgtgcgacggcgtcc
ggcgtcgccacgtcgtcgtcggaactcccggccggcgccatcgtcgacgtcaaggtcatt
gaagtggacgagagctttgtgcgcgtccagaccaacgacggcctcgaaggcgtcgtcgcc
aacgcccacttgaccgactttcctcgcgcgatcccggcgtccgtgtcggtcgacgacacg
ttctcgtgcatggtgctcttccaggccaaggacggtctcctccacttgaccaagaagccg
ctgcttctggcggccaaggaacagaagacgatgccgtcgcgctttgccgatgtgacggaa
ggcatggcggtcacggggtttgtgcgcgagatccgcccgtttggcgtctttgtgagcttc
ctcaacaacctccaggcgctcgcgcccatcgcgttcctcaccgaccgctttgtcagcagc
gccgacggtctttttgagattggcgacacggtgcactgctttgtcgagaaggtccacacc
gagaagcagcagtttatgctcgactttcgcacgtgcgacaagccccgcgtggacgccgac
tatgcgccggcgctcttcgcagagcacgcgttgtcgcacggcgccgcgcagccgtggaag
gcgcaccacgttggccataccgaggccgccgagttcgtctcggccaaggcgtacggtcat
gtgtgctcgctcgacgacgagacgacggtcattgtcacggagacggacggcctcgactgg
aaggagaaccaaaaggtcaacgtccgcctgatcgactacgactttgaaaagcaagtgttc
ttcgcgaccgcgtcctcggcgctcgtcaaggccggcgagaagaaggcccgcaagaaggcg
ctgcggctcgaggccaacgcggtcgtcgacgcgacgattctgctcacgcgcgacgagtac
gcagttgtcgccgtcgattcgacggtcgctgtcttgcaggtcgcgtcgttctttagcccg
tcgtcgtcctgtgcgtcgctgcagctcgaggccggccaggtgcacgcgtgccgcgtcgcc
gggcacgtccagcaaaacccgttcgacgacctcgccgtcctcgtcctgctagcgtccgag
aagaaggcgaccaagaccaaggccaagaagacggaccacgaacacttgcccaagtacgcg
ggctcggatctcgtccttggcggcctcgtcacgggccgcatcgtcggtatcaaggaagac
acgatggagctcaagatcaagtgctccaagagcgcgggcaaggtcaacgcgttcgtgtcg
ctcgtcgacgtcgacagcaacggcgccggcgcgcacccgtttgatgcgttctcgaccaac
acggtcgtcaccggccgcatcgtaagcatggtcgagaagggcgccaaccagcgcaagccc
gtaggccccgagaacgtggccaacttccgctcgctcaacgtctcgctgcggtcgggcgac
cagtcgggcgacgttgcggcccgcgccgactgggcgggcgccggcctcgaagcccttgaa
gccggtgagatgatcccgggtgtcgtcgtcgagacggccaaggacggtgtcatgatccgc
ctcagcgcgcgcgtgctctcctcggacattaaggtcctcgagacgtttacgcagtcgttt
gcggtcggtacgcgcgtcaactgccgcgtcctgtcgctggacgtcgagaagaagcacatt
gatctcagctgcctcgcggccgcgcgcgcgacgaacgtcggcgacgtggtcctcggccgc
atcaacacgaacgtcaaggccctcgcggcgccgtcgatcatggtgcagctcggtgcccac
gcctttggccgcgtctgcgtcaccgaagtcgtcgacacgccgtcgtcgctcccgttggcg
acgctcgaacacggcgcgtttgtccgcgcggtcgtgctctcgaacgacaagcacgtggtg
gagctgtcgctcaagccgtcggcggtcgcggacccggcgtcgtacgtcgcgttggatgcg
gcgctggcggccaaggtcccggcgctcggcgacctcgtcacgggctacgtcgcgaccgtc
gggtcgggcggctgctttgtgcgctcgcaccgctcgcgcacggcgcgtgtcctgttgcgc
gagctcagcgacgatttcgtcaaggagcccgccaagatgttccctgccggtacgctcgtg
gtgggccgcgtgaccaaggtcgagaacgacaaggtcgaattgagtctcaaggcgtcggtg
gtcacggaaggcgcgggcggtgcgtcgtcggtgacgctcgagtcgctcagcgtcggcatg
aacgtcaagggcacgatctcgagcgttcaaacttacggcgtgtttatcaagatcgagaac
tcgacgctcagcggcctctgccatatctcggaagtcgccgactcgaaggtcaagtcgctc
gacggcgtcttctcggccggcgactacgtcaaggccaaggtgctcaagatcgagaaccgc
cgcatctcgctcggcttgaagccgtcgtacttcgcggacgacgagagctcgtccagcgaa
gacgagtcgtcggacgacgaggacgacgaagaggagaaggaagacgtggacatggaagcg
gccgacagcgacgacgatgaggacgaagaagaggagaaggaagacgtggacatggaagcg
gccgacagcgacaacgatgaggatgaggatgaggacgccgaggatgaggacgaagcgccc
aaggcggccccgtacgcggactttgcctgggacggcttctcgatcgaaaagagcaacaag
cccgcggacgacgacgacgacgacgacgaggcgaacgcgacggacgcggtctccaaggcc
aaggccaagcgcatgaagaaagcggccaaggagaacgaagacatgtatgtcgcgtaccgc
gagcgcgcgctcgcggccggcgagacggtgcccgagtcggccgacgacttcgagcgtctc
ctcgcggtctcgccgctcaactcgttcctttggatccagtacatggcgttccacgtgtcg
atgacggacattgccgcggcccgtgacgtggcggtccgtgcgacgaccaaggtgacgttc
cgcgaagcccaggagaagctcaacgtgtgggtcgcgtacctcaacttggagcacgaccac
ggcgacgagagctcgttcgggcgcgtcttcaactctgcgctccgcgccaacaaccccaag
cacatgtacctcaagctcatcgagctctacgtgcgccacgagcaagcggacgatgtccac
gcgtcgctcaagacgatgcagaagaagttcaacacgagcgccaaggtgtggctccgctcg
tgcgagtgggcgatgcaggaaggcacgccggacgtggcgcgcaaggtgctccagcgctcg
atgcagtcgctccccaagcacaagcacctcaaggtcctcaccaagtttgccttgatgcag
tacgactatggcgagatggagcacggccggtcgatgtttgagcaaatcctgagcaactac
gccaagaagatggacctctggaacgtgtacctcgaccgcgaaatcaagtttggcgagctc
gcgagcacccgcctcctcttcgagcgcgtcgtctcgatggccctctcggccaagaagatg
aaggccatcttcaagaagtacctcacgttcgagatggaccacggcgacgaggccggcgtc
gcgcacgtcaaggagctcgcggcggcgtacgtcgagtcgtcgtcggcgtaa
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