KEGG   Saprolegnia parasitica: SPRG_06549
Entry
SPRG_06549        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
spar  Saprolegnia parasitica
Pathway
spar03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPRG_06549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_06549
   03036 Chromosome and associated proteins [BR:spar03036]
    SPRG_06549
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SPRG_06549
Chromosome and associated proteins [BR:spar03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SPRG_06549
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_ACSF4 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_Aladin NBCH_WD40 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_DCAF12 Beta-prop_EML Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_NOL10_N DUF3717 Beta-prop_WDR75_1st PAC11 DUF8383 Beta-prop_VPS8 YuiB
Other DBs
NCBI-GeneID: 24128894
NCBI-ProteinID: XP_012200753
UniProt: A0A067CHR7
LinkDB
Position
Unknown
AA seq 365 aa
MSFGGFGVSATATSASPAAADYDVPPDVPDSIQDLSWSPTANVLVAGSWDNYVRCWEVNH
QQTQFQAVARAQIQHKAPVLCTAFSAVRVLPWAMAAKHVLGRLDRVSGSCDKTALMWQLN
GPATGQQIAQHDQPIRGIRFVPTANCVVTGSWDKTVKYWDTRAPQAQATVQLSDRVYALD
VVYPLMVVATADKMIHCFDLTKPSQIFASIKSNLKLQTRCIAAFPDASGFAIGSIEGRVA
IQHIDEKKKQEADFAFKAHRDTANNSVNPVSSVAFHTLNGKMATTGTDGSYTFWDKDMRK
MLRNFPKIPNYQGISVGKFNAQGDIFAYATSYDWHKGAEGYNQQARNVIRLHHVDQTDLT
VKAKK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtcattcggtggattcggcgtctcggcgacggcgacgagcgcgagcccggcggcggcc
gactacgacgtcccgcccgatgtccccgacagcatccaggacctgagctggagcccgacg
gccaacgtcctcgtcgctggctcctgggacaactacgtgcgctgctgggaggtcaaccac
cagcagacgcagttccaggcggtggcccgcgcccagatccagcacaaggcgcccgtgctc
tgcacagcgtttagcgcggtacgtgtgctaccgtgggccatggcggctaagcacgttcta
ggacggctcgaccgtgtttcgggcagttgcgacaagacggcgctcatgtggcagctcaac
gggcccgcgaccggccagcagatcgcgcagcacgaccagccgatccgtggcatccgcttc
gtgcccacggccaactgcgtcgtcaccggctcctgggacaagaccgtcaagtactgggac
acgcgtgcgccgcaggcacaagccacggtgcagctcagcgaccgcgtgtacgcgctggac
gttgtctacccgctcatggtcgtcgcgaccgccgacaagatgatccactgctttgacttg
accaaaccgtcgcaaatctttgcctcgatcaagtccaacctgaagctgcagacgcgctgc
atcgctgcgttcccggacgcgtccggctttgcgatcgggtccatcgaaggccgtgtcgcc
atccagcacattgacgagaagaagaagcaagaggccgacttcgcgttcaaggcgcaccgc
gacacggccaacaactctgtcaaccccgtgagtagcgtcgcgttccacacgctcaacggc
aagatggcgacgacggggaccgacggctcgtacacgttctgggacaaggacatgcgcaag
atgctgcgcaactttcccaaaattcccaactaccagggcatttccgtcggcaagtttaac
gcgcagggcgatatctttgcgtacgcgacgtcgtacgactggcacaagggcgccgagggg
tacaaccagcaggcgcgcaacgtcattcgcctgcaccacgtcgaccagaccgacctcacg
gtcaaggctaagaagtga

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