Saprolegnia parasitica: SPRG_06703
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Entry
SPRG_06703 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_06703
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SPRG_06703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR54
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
24129034
NCBI-ProteinID:
XP_012200903
UniProt:
A0A067CCG4
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MEDQVLVLGSSKDGNVYVVDPSCSSQLFLFKGSSCARHGLAIVPRTGHLITIQPGKLALH
MHMWGKDVPTLKCHVTEPMGPLIATRDGNFCIAGGASGKIYVWCVATGALLHVWDGHYKA
VSALALTPDDAFLVSGGEDAVVHVWRLLDILDASHEGSTLNQGLSPLHTWTDHVLPITHV
HCGFGGRIFTASLDRTAKVWDLVHGRALVSVTCPSYVNVVVPDAMEHRLFLGAGDGRIYV
VDLHAAATAATAAHARVVLAADGAPFSQETLSAEGFVGHEHPVTTLVVSLCGRFVISGDD
DGVVRVWDSVSRQALRTMNFVKGSIADMALLPRPVGLFHPVAKTSHELPIAPFKKYINAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaagtgctcgtcctcggctcgagcaaggacggcaacgtctacgtcgtcgac
ccgtcgtgctcgtcgcagctcttcctcttcaagggctcatcctgcgcgcgccatggcctc
gcgatcgtgccccgcaccggccatctcatcacgatccagcccgggaagctcgcgctgcac
atgcacatgtggggcaaagacgtcccgacgctcaagtgccacgtgaccgagcccatgggc
ccgctcatcgcgacgcgcgacggcaacttctgcatcgccggcggcgcgtccggcaaaatc
tacgtctggtgcgtcgccaccggcgcgctcctccacgtctgggacggccactacaaggcg
gtctcggcgctcgccttgacgccggacgacgcgttccttgtttcgggcggcgaagacgcg
gtcgtgcacgtgtggcgcctcctcgacatcctcgacgcgtcccacgaaggctcgacgctc
aaccaagggctctcgccgctgcacacgtggaccgaccacgtgctcccgatcacgcacgtg
cactgcggctttggcgggcgcatcttcacggcgtcgctcgaccgcacggccaaggtgtgg
gacctcgtgcacggccgagcgctcgtctcggtcacgtgtccctcgtacgtcaacgtggtc
gtgcccgacgcgatggagcaccggctcttcctcggcgccggcgacggccgcatctacgtc
gtcgatctacacgccgccgcgacggcggcgaccgcggcccacgcccgcgtcgtgctggcg
gcggacggcgcgccgttctcgcaagagacgctgagcgccgaggggtttgtgggccacgaa
cacccggtgacgacgctggtcgtgagcctctgcggacgctttgtcatctcgggcgacgac
gacggcgtcgtgcgcgtctgggactcggtttcgcgccaggcgctgcggacgatgaacttt
gtcaagggctcgatcgccgacatggcgctgctgccgcgccccgttgggctcttccacccc
gtggccaagacgtcccacgagctgccgattgcgcccttcaaaaagtacatcaacgcctcg
tag
DBGET
integrated database retrieval system