KEGG   Saprolegnia parasitica: SPRG_06703
Entry
SPRG_06703        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
spar  Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:spar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_06703
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    SPRG_06703
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR75_1st WDR54 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 24129034
NCBI-ProteinID: XP_012200903
UniProt: A0A067CCG4
LinkDB
Position
Unknown
AA seq 360 aa
MEDQVLVLGSSKDGNVYVVDPSCSSQLFLFKGSSCARHGLAIVPRTGHLITIQPGKLALH
MHMWGKDVPTLKCHVTEPMGPLIATRDGNFCIAGGASGKIYVWCVATGALLHVWDGHYKA
VSALALTPDDAFLVSGGEDAVVHVWRLLDILDASHEGSTLNQGLSPLHTWTDHVLPITHV
HCGFGGRIFTASLDRTAKVWDLVHGRALVSVTCPSYVNVVVPDAMEHRLFLGAGDGRIYV
VDLHAAATAATAAHARVVLAADGAPFSQETLSAEGFVGHEHPVTTLVVSLCGRFVISGDD
DGVVRVWDSVSRQALRTMNFVKGSIADMALLPRPVGLFHPVAKTSHELPIAPFKKYINAS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggaagatcaagtgctcgtcctcggctcgagcaaggacggcaacgtctacgtcgtcgac
ccgtcgtgctcgtcgcagctcttcctcttcaagggctcatcctgcgcgcgccatggcctc
gcgatcgtgccccgcaccggccatctcatcacgatccagcccgggaagctcgcgctgcac
atgcacatgtggggcaaagacgtcccgacgctcaagtgccacgtgaccgagcccatgggc
ccgctcatcgcgacgcgcgacggcaacttctgcatcgccggcggcgcgtccggcaaaatc
tacgtctggtgcgtcgccaccggcgcgctcctccacgtctgggacggccactacaaggcg
gtctcggcgctcgccttgacgccggacgacgcgttccttgtttcgggcggcgaagacgcg
gtcgtgcacgtgtggcgcctcctcgacatcctcgacgcgtcccacgaaggctcgacgctc
aaccaagggctctcgccgctgcacacgtggaccgaccacgtgctcccgatcacgcacgtg
cactgcggctttggcgggcgcatcttcacggcgtcgctcgaccgcacggccaaggtgtgg
gacctcgtgcacggccgagcgctcgtctcggtcacgtgtccctcgtacgtcaacgtggtc
gtgcccgacgcgatggagcaccggctcttcctcggcgccggcgacggccgcatctacgtc
gtcgatctacacgccgccgcgacggcggcgaccgcggcccacgcccgcgtcgtgctggcg
gcggacggcgcgccgttctcgcaagagacgctgagcgccgaggggtttgtgggccacgaa
cacccggtgacgacgctggtcgtgagcctctgcggacgctttgtcatctcgggcgacgac
gacggcgtcgtgcgcgtctgggactcggtttcgcgccaggcgctgcggacgatgaacttt
gtcaagggctcgatcgccgacatggcgctgctgccgcgccccgttgggctcttccacccc
gtggccaagacgtcccacgagctgccgattgcgcccttcaaaaagtacatcaacgcctcg
tag

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