Saprolegnia parasitica: SPRG_07307
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Entry
SPRG_07307 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03015
mRNA surveillance pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_07307
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_07307
03015 mRNA surveillance pathway
SPRG_07307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_07307
03041 Spliceosome [BR:
spar03041
]
SPRG_07307
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SPRG_07307
Spliceosome [BR:
spar03041
]
Common components
Common spliceosomal components
Cap binding complex
SPRG_07307
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF8181
UPF0004
Motif
Other DBs
NCBI-GeneID:
24129588
NCBI-ProteinID:
XP_012201489
UniProt:
A0A067CB45
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MADYGGGYGGRDGGRGYNDGPRGGYNDRGFQDGNRRRKRSDDMSDNYGNKRHRNNYNQRG
DYRDNYRGRRDDNYRDNNRNGGDDDVMELKRRVITLGDSVNVSDTHAVRDVLSRCGEWLG
EQLMFQAQEIAALVVTCAGRLSAKSEWYALLTTLLNEKNGVFGKKVVELACQAIQTDLNW
WQSEDDPAEGTTELLRIKLLVRFLGHLATTKMIVAADVVQLLANFVALCTPEPIAPNNRA
QQDATAIKDYIAYIVLDTLLHCGHALSVAAEEPFDELIAQLSAYMAFREVDTTHSRFVPS
NSWVVQRVRLNMLCDPEDDDVLGVAKALDPLAATWTAVEQLVAGLSRDSTKSDVALYNPS
QSSWKVHALMYPQQFFMTVIKNTVPFALPASAFPFTLELAAIHAKKLPSYSVVFRILNDE
SGPIGVAIAQMHLPSYLVARSYFEDILKAFAPSVAETSKQLLTCAHWLNARLENVQAEFI
LVETLLVHILQHRDVPFGGAVLYQMLKQDAKTIQSALAILMELLFRQIPTMQMGTLDVFV
RFFSLFLSNFEYKWPWAHWNYVLDAQADDAQRLFVSAVLERCVRLSYRQHMQSVLPEAFH
MLLPPTRSTSSGFAKTKRIKARDDAAVIEAWCNEKTSSLDKAIVLEMVVSALLEAGSATF
THFRSLLEKYQELLATLTASTEDALAAINAVGAVWEQSPQHVILILSLMMRHKVLSSTAI
STWMFSSDAVQQYSWHYVWEILDNSIVYGIERVEANPEDAAALDDLQSMLRAVLEGFMKV
VADHKFSCDKEGTSFKDNWYTSTLARMKAVGRRFRVALEPLLPSLETGVFAAAGAEQDVC
TVFHYIKESYQAK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggactacggaggcggctacggcggtcgcgacggaggtcgcggctacaacgatggc
cctcgtggcggctacaacgaccggggcttccaagacggcaaccgccgccggaagcgctcg
gacgacatgtcggacaactatggcaacaagcgccaccgcaacaactacaaccagcgcggc
gactaccgcgacaactaccgcggtcgccgcgacgacaactaccgcgacaacaaccgcaac
ggcggtgacgacgacgtcatggagctcaagcggcgcgtcattacgcttggcgacagcgtg
aacgtgagcgacacgcacgcggtgcgcgacgtgctctcgcgctgcggcgagtggctcggc
gagcagctcatgttccaggcgcaagaaatcgcggcgctcgtcgtgacgtgcgccggtcgc
ctcagcgccaagagcgagtggtacgcgctgctcacgacgctcctcaacgagaagaatggt
gtctttggcaaaaaggtcgtcgagctcgcatgccaagcgatccaaaccgacctcaactgg
tggcaatccgaggacgaccccgctgagggcacgactgagcttctgcgcatcaagctcctc
gtgcgcttcctcggccacctcgcgacgaccaagatgattgtcgctgccgacgtggtccag
ctcctcgccaactttgtcgcgctctgcacgcccgagccgatcgcgcccaacaaccgggcc
cagcaagacgcgactgcgatcaaggactacattgcgtacatcgttctcgacacgcttctt
cactgcggacatgcgctctcggtggccgccgaggaaccgttcgacgagctcattgcgcag
ctctcggcgtacatggcgttccgcgaagtcgacacgacccactcgcgcttcgtaccctcc
aacagctgggtcgtccagcgcgtgcgtctcaacatgctctgcgacccggaagacgacgac
gtgctgggcgtcgccaaggcgctggacccgctggcggccacgtggacggcggtcgagcag
ctcgtggccggcctctcgcgggactcgaccaagtcggacgtggcgctctacaatccgtcg
caatcgtcgtggaaggtccacgcgctcatgtacccgcagcagtttttcatgacggtcatc
aaaaacacggtgccctttgcgctgccggcgtcggcctttccgttcacgctcgagctggct
gccatccatgccaagaagctgccctcgtactcggtcgtgtttcgcattctcaacgacgag
agcggcccgatcggtgtcgcgattgcccaaatgcacctgccgtcgtacctcgtcgcccgg
agctactttgaagacattctcaaggcgtttgcgccgtcggtggccgagacgtccaagcaa
ctcttgacgtgtgcgcactggctcaacgcgcgcttggagaatgtccaagccgagttcatt
ttggtcgagacgctcctcgtgcacattttgcagcaccgcgatgtgccgtttggcggcgcc
gtcctctaccagatgctcaagcaggacgcgaaaacgatccagagcgcactcgcgatcctc
atggagctcctctttcgccagatcccgaccatgcagatgggcacgctggacgtgtttgtg
cgcttcttctcgctcttcctctccaatttcgagtacaagtggccgtgggcccattggaac
tatgtgctcgacgcgcaagccgacgacgcgcagcgcctctttgtctcggccgtcctcgag
cgctgcgtgcgcctgagctaccgccagcacatgcagtcggtgctccccgaggcgttccac
atgctgctgccgccaacccgctccacatcatccggtttcgccaagacgaagcggatcaag
gcgcgcgatgacgccgcggtcatcgaggcgtggtgcaacgagaagacgtcgtcgctcgac
aaggcgatcgtgctggagatggtcgtctcggcgctcctcgaagccggctcggccacgttt
acgcattttcgaagcctcttggaaaagtaccaagagctcctggccaccctcacggcgtcg
acggaagatgcgctcgcagccatcaacgcggtcggcgcggtctgggagcagtcgccgcag
cacgtgattctcatcttgagcctcatgatgcgccacaaggtgctctcgtcgaccgcgatc
tcgacgtggatgtttagctcggacgctgtgcagcagtacagctggcactatgtgtgggag
attctcgacaactcgatcgtctacggcattgagcgcgtcgaggccaacccggaggacgcg
gcggcactcgacgacctccaatcgatgctccgtgccgtcctcgagggctttatgaaggtg
gtggcggaccacaagttttcgtgcgacaaggaaggcacgtcgttcaaggacaactggtac
accagcacgctcgcacgcatgaaggctgtcggccggcgcttccgcgtcgcgctggagccg
cttctgccgtcgctggaaactggcgtgtttgctgcggctggtgccgagcaggatgtgtgc
acggtcttccactacatcaaagagtcgtatcaggccaagtag
DBGET
integrated database retrieval system