KEGG   Saprolegnia parasitica: SPRG_07307
Entry
SPRG_07307        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
spar  Saprolegnia parasitica
Pathway
spar03013  Nucleocytoplasmic transport
spar03015  mRNA surveillance pathway
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_07307
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPRG_07307
   03015 mRNA surveillance pathway
    SPRG_07307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_07307
   03041 Spliceosome [BR:spar03041]
    SPRG_07307
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     SPRG_07307
Spliceosome [BR:spar03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    SPRG_07307
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G_like MIF4G DUF8181 UPF0004
Other DBs
NCBI-GeneID: 24129588
NCBI-ProteinID: XP_012201489
UniProt: A0A067CB45
LinkDB
Position
Unknown
AA seq 853 aa
MADYGGGYGGRDGGRGYNDGPRGGYNDRGFQDGNRRRKRSDDMSDNYGNKRHRNNYNQRG
DYRDNYRGRRDDNYRDNNRNGGDDDVMELKRRVITLGDSVNVSDTHAVRDVLSRCGEWLG
EQLMFQAQEIAALVVTCAGRLSAKSEWYALLTTLLNEKNGVFGKKVVELACQAIQTDLNW
WQSEDDPAEGTTELLRIKLLVRFLGHLATTKMIVAADVVQLLANFVALCTPEPIAPNNRA
QQDATAIKDYIAYIVLDTLLHCGHALSVAAEEPFDELIAQLSAYMAFREVDTTHSRFVPS
NSWVVQRVRLNMLCDPEDDDVLGVAKALDPLAATWTAVEQLVAGLSRDSTKSDVALYNPS
QSSWKVHALMYPQQFFMTVIKNTVPFALPASAFPFTLELAAIHAKKLPSYSVVFRILNDE
SGPIGVAIAQMHLPSYLVARSYFEDILKAFAPSVAETSKQLLTCAHWLNARLENVQAEFI
LVETLLVHILQHRDVPFGGAVLYQMLKQDAKTIQSALAILMELLFRQIPTMQMGTLDVFV
RFFSLFLSNFEYKWPWAHWNYVLDAQADDAQRLFVSAVLERCVRLSYRQHMQSVLPEAFH
MLLPPTRSTSSGFAKTKRIKARDDAAVIEAWCNEKTSSLDKAIVLEMVVSALLEAGSATF
THFRSLLEKYQELLATLTASTEDALAAINAVGAVWEQSPQHVILILSLMMRHKVLSSTAI
STWMFSSDAVQQYSWHYVWEILDNSIVYGIERVEANPEDAAALDDLQSMLRAVLEGFMKV
VADHKFSCDKEGTSFKDNWYTSTLARMKAVGRRFRVALEPLLPSLETGVFAAAGAEQDVC
TVFHYIKESYQAK
NT seq 2562 nt   +upstreamnt  +downstreamnt
atggcggactacggaggcggctacggcggtcgcgacggaggtcgcggctacaacgatggc
cctcgtggcggctacaacgaccggggcttccaagacggcaaccgccgccggaagcgctcg
gacgacatgtcggacaactatggcaacaagcgccaccgcaacaactacaaccagcgcggc
gactaccgcgacaactaccgcggtcgccgcgacgacaactaccgcgacaacaaccgcaac
ggcggtgacgacgacgtcatggagctcaagcggcgcgtcattacgcttggcgacagcgtg
aacgtgagcgacacgcacgcggtgcgcgacgtgctctcgcgctgcggcgagtggctcggc
gagcagctcatgttccaggcgcaagaaatcgcggcgctcgtcgtgacgtgcgccggtcgc
ctcagcgccaagagcgagtggtacgcgctgctcacgacgctcctcaacgagaagaatggt
gtctttggcaaaaaggtcgtcgagctcgcatgccaagcgatccaaaccgacctcaactgg
tggcaatccgaggacgaccccgctgagggcacgactgagcttctgcgcatcaagctcctc
gtgcgcttcctcggccacctcgcgacgaccaagatgattgtcgctgccgacgtggtccag
ctcctcgccaactttgtcgcgctctgcacgcccgagccgatcgcgcccaacaaccgggcc
cagcaagacgcgactgcgatcaaggactacattgcgtacatcgttctcgacacgcttctt
cactgcggacatgcgctctcggtggccgccgaggaaccgttcgacgagctcattgcgcag
ctctcggcgtacatggcgttccgcgaagtcgacacgacccactcgcgcttcgtaccctcc
aacagctgggtcgtccagcgcgtgcgtctcaacatgctctgcgacccggaagacgacgac
gtgctgggcgtcgccaaggcgctggacccgctggcggccacgtggacggcggtcgagcag
ctcgtggccggcctctcgcgggactcgaccaagtcggacgtggcgctctacaatccgtcg
caatcgtcgtggaaggtccacgcgctcatgtacccgcagcagtttttcatgacggtcatc
aaaaacacggtgccctttgcgctgccggcgtcggcctttccgttcacgctcgagctggct
gccatccatgccaagaagctgccctcgtactcggtcgtgtttcgcattctcaacgacgag
agcggcccgatcggtgtcgcgattgcccaaatgcacctgccgtcgtacctcgtcgcccgg
agctactttgaagacattctcaaggcgtttgcgccgtcggtggccgagacgtccaagcaa
ctcttgacgtgtgcgcactggctcaacgcgcgcttggagaatgtccaagccgagttcatt
ttggtcgagacgctcctcgtgcacattttgcagcaccgcgatgtgccgtttggcggcgcc
gtcctctaccagatgctcaagcaggacgcgaaaacgatccagagcgcactcgcgatcctc
atggagctcctctttcgccagatcccgaccatgcagatgggcacgctggacgtgtttgtg
cgcttcttctcgctcttcctctccaatttcgagtacaagtggccgtgggcccattggaac
tatgtgctcgacgcgcaagccgacgacgcgcagcgcctctttgtctcggccgtcctcgag
cgctgcgtgcgcctgagctaccgccagcacatgcagtcggtgctccccgaggcgttccac
atgctgctgccgccaacccgctccacatcatccggtttcgccaagacgaagcggatcaag
gcgcgcgatgacgccgcggtcatcgaggcgtggtgcaacgagaagacgtcgtcgctcgac
aaggcgatcgtgctggagatggtcgtctcggcgctcctcgaagccggctcggccacgttt
acgcattttcgaagcctcttggaaaagtaccaagagctcctggccaccctcacggcgtcg
acggaagatgcgctcgcagccatcaacgcggtcggcgcggtctgggagcagtcgccgcag
cacgtgattctcatcttgagcctcatgatgcgccacaaggtgctctcgtcgaccgcgatc
tcgacgtggatgtttagctcggacgctgtgcagcagtacagctggcactatgtgtgggag
attctcgacaactcgatcgtctacggcattgagcgcgtcgaggccaacccggaggacgcg
gcggcactcgacgacctccaatcgatgctccgtgccgtcctcgagggctttatgaaggtg
gtggcggaccacaagttttcgtgcgacaaggaaggcacgtcgttcaaggacaactggtac
accagcacgctcgcacgcatgaaggctgtcggccggcgcttccgcgtcgcgctggagccg
cttctgccgtcgctggaaactggcgtgtttgctgcggctggtgccgagcaggatgtgtgc
acggtcttccactacatcaaagagtcgtatcaggccaagtag

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