Saprolegnia parasitica: SPRG_07487
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Entry
SPRG_07487 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_07487
Spliceosome [BR:
spar03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SPRG_07487
Other components
Complex C specific factors
SPRG_07487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
DUF3245
Motif
Other DBs
NCBI-GeneID:
24129759
NCBI-ProteinID:
XP_012202015
UniProt:
A0A067C9U1
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MAGNGRSNADAAAMLRGPRRTRAPGGDDGTRKPSRGGLGFVAAADAAEPTPGYSTSSFAA
MFTPASVQDSSGDTNDAPDEENDAPRGLGFTRAADEPAAAPRSGLSNAAFAAMFTSASRP
DHTDATESHQTNPQSDATPMDDNEPNDAPPERSGFSNTDFAAMFRTATVETADDTAGASN
STKPSAPAPPPAPEPVPEPKRAPILPPANIASMGKWEKHTKGFGMKMLAKMGFKGRLGKD
EQGIAVPVAVKARPNQLGLGAAGFKEASSLAQNQQVERELHGKTIEDEEEVARKEQVFGT
DDGAWRKRLGAPKKRKRKSAKDLFVDDDDEDAPMPTTRIIDMRGPDVVTYENGLSELQKQ
SLLAAPVLGQELLYNLRTIVNEAEGAIRVGRQRIAVERSRLHVLQNAASATSEKHHADAQ
SQANLAAIRCALQHLHAEMAGASAPRGLELITDTLVGLRQQYPVEFESQRIIDVLPSLGL
PLLKSLLVSWDPLDDVDDAALAFQSCFTWVRDCLTTCVATPSAQDAGLFAVNLDTRHDKL
YQHLCEVVLVPHVTSALHRWDVRRPCLGLIAFLDSFAHPQIVSHLLSAAILPKLQHAVRS
WNPQTDPVHLHEWLLPWSTRFLKDEFDKPLFPLIRETLSRALAQWHPRDASIFTVLSPWQ
AVWTPEDFAVFTHKTIARKLLRCLNRELSVEPGSTNDVAPLQWTFQWHGLLPDRQLIALL
EGEVFSKWLHVLRRWVEKARAAAIEDRKTMVSEMVVWFHGWKALFAPLWHLDRIRLQFAM
GLQLLKCVERGTLPSLDVLASTYDKALVLGGKQAARARDVPVATDVLHIRDVLEALALDA
GIDFVPHPRNHRVSGKPVYCFGSLSVYFEADVVFAEAAKGSFAPMDIESLLRRARAS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaatggacgctcgaacgccgacgcggccgcgatgcttcgtggaccaaggcgc
acgcgggcgccgggcggcgacgacggaacgcgaaagccgtcgcgtggaggccttggcttc
gtagcagcggccgacgcggccgagccaacgcccgggtactccacatcaagctttgcagcg
atgttcactcccgcttcagtacaggactcgtccggtgacaccaatgacgcgccagatgaa
gaaaacgatgcaccgcgcgggctgggcttcacccgagcggcagacgaacccgcagcagcg
ccgcgcagtggtctctcgaacgcagccttcgccgccatgtttacatcggcgtcgcggccc
gaccacaccgatgccaccgaaagccaccaaacaaaccctcaaagcgacgctacaccaatg
gacgacaacgagcccaacgacgcgcctcccgagcggtcgggcttttccaacacggacttt
gcagccatgttccgtaccgcgacagtcgaaacagcagacgacaccgcaggcgcctctaac
tctaccaagccgtctgccccagcgccgccgccagccccagagccagtcccagagcccaag
cgggcgcccatactgccgccagccaacattgcgagcatgggcaagtgggagaagcacacc
aaggggtttggcatgaagatgctggccaagatgggcttcaaagggcgtctcgggaaggac
gagcaaggtattgcagtgccagttgccgtcaaggcgcgcccgaaccagctcggtctcggc
gccgcgggctttaaagaggcctcgtcgctcgcgcaaaaccagcaggtcgagcgggagctg
cacggcaagacgatcgaagacgaagaagaggtcgcgcgcaaggagcaagtgtttggaacg
gacgacggcgcgtggcgcaagcgacttggtgcgccgaaaaagcgcaagcggaaatcggcc
aaggaccttttcgtcgacgacgacgatgaggatgcgcccatgcccacgaccaggatcatc
gacatgcgtggtcccgacgtggtgacgtacgagaacgggctctcggagctccagaagcag
tcgctcctcgcggcccccgtgctcggccaagagctcctctacaacctccgaacgatcgtc
aacgaagccgaaggcgcgatccgagtcggccggcagcgcattgccgtcgagcggtcgcgg
cttcacgttcttcaaaacgcggcatcggccacgtccgagaagcaccacgccgatgcgcaa
tcccaagccaatttggcggcgatccggtgcgcactgcagcatttgcacgcagagatggcc
ggtgcgtccgcgccccgtggcctcgagctcattacggacaccctcgtgggcctccggcag
cagtacccggtcgagtttgagtcgcagcgcatcattgacgtcttgccgtcgcttggtctg
ccgctgctcaagtcgctcctcgtgtcgtgggacccgctggacgacgtcgacgacgccgcg
ctcgccttccaatcgtgctttacgtgggtgcgggactgcttgacgacctgcgtcgcgacg
ccgtcggcccaagacgccgggctttttgccgtcaacctcgacacgcgccacgacaagctg
taccagcacctgtgcgaggtcgtcctcgtcccgcacgtcacgtcggcgctgcatcggtgg
gacgtccgtcgcccgtgccttggtctgattgcgtttctcgactcgttcgcgcacccgcag
attgtgtcgcatctgctgtcggctgctattttgcccaagctccagcacgccgtgcggtcg
tggaacccgcaaaccgacccggtgcatctgcacgagtggctccttccgtggtcgacgcgc
tttctcaaggacgagtttgacaagccgctgttcccgctcatccgagagacgctcagtcgc
gccctcgcgcagtggcacccgcgcgacgcgtccatctttaccgtgctctcgccgtggcag
gcggtgtggacccccgaagactttgccgtgtttacgcacaagaccattgcgcgcaagctg
ctccggtgcttgaaccgcgagctctcggtcgagcctggatcgacgaacgatgtcgcgccg
ctgcagtggacgtttcagtggcacggactcctccccgaccggcagctcatcgcgctgctc
gaaggtgaagtcttctccaagtggctgcacgtgctccggcgctgggtcgagaaggcgcga
gccgccgcaatcgaggaccgcaagaccatggtgtcggagatggtcgtctggttccatggc
tggaaagcgctctttgcgccgctctggcacttggatcgcatccgcctccagtttgccatg
ggcctccagctgctcaagtgcgtcgagcggggcacgctgccgtcgctggacgtgctcgcg
agtacgtacgacaaggcgctcgtgctcggcggcaagcaagccgcccgagcgcgcgatgtg
cctgtcgccaccgatgtgcttcacattcgcgacgtgctggaagcgctggcgctggacgcc
ggtatcgactttgtcccgcacccgcgcaatcaccgcgtgagtggcaagcccgtctactgt
tttgggtctctctccgtctactttgaagccgacgttgtgtttgccgaagcggcaaaaggg
tcgtttgcccccatggacattgagagcctcttgcgtcgagcccgcgcctcttga
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