KEGG   Saprolegnia parasitica: SPRG_07502
Entry
SPRG_07502        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K13133  gem associated protein 5
Organism
spar  Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:spar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_07502
   03041 Spliceosome [BR:spar03041]
    SPRG_07502
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     SPRG_07502
   mRNA cycle factors
    P-body specific factors
     SPRG_07502
Spliceosome [BR:spar03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    SPRG_07502
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40 Beta-prop_WDR5 TPR_GEMI5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_IFT140_1st WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_Vps41 WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 BBS2_Mid Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_SCAP B-prop_COPA_B_2nd Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_VPS8 PALB2_WD40 tify Beta-prop_WDR75_1st TPR_1
Other DBs
NCBI-GeneID: 24129774
NCBI-ProteinID: XP_012202030
UniProt: A0A067C9V2
LinkDB
Position
Unknown
AA seq 1103 aa
MIDRQRKHKTEIMAIASAEGHTIVAGDRNGVLSVWHRDTGIATLATPIAGDCIYCLHVAG
GQVAIGYRSGKVILWDLHHGAITTRLKGHEEEVHAVSWFTAADGKLLLATSSRDKKLCVY
DGDNVIMESQLPKPKKAISAHQLGRLWFTHAWIPGAEADAVRLVTSSYNGELYSWEWSLS
KKRPKLSVAPTIVKQGHTRPIFNIAALSLSPASTYIITVSMDRDVRVLHAPSMTSHSKLA
GLGGHVYTLQLNASGVLAAGIGDNTIRLVRDVQSPQTTCDLVWKGLQSKVTALAWHPISP
TILAYGCEDGAVGYYDTSSHQHTRFKAYQKGMIHQVAWRAPATMDAAPEQDWLVALEAVE
HGERDVMEATVASPSSSALQLWICAGDGTLTVANPEKSDAPMKAVNKRWGVHNVTSFAWQ
PDSVTCAVGTKDGIVHLVVNDDKAHQYMDHSKTVSCVKWCRSTLVTASYDGSVCVYDFTS
ERPQAPARVFKGHATGVTCIAWSPSTEYLASASMDGTVQVWPQSGDRGFNFRGHTGRVLT
VAWVDDETLVSAGEDQSIRAWAYADQTCTLPPKSKDDSAPAPAPVVTSKKAVPKQPKTLA
AVAGLLPKADTNVESVVKMLDPPASVAMLDDAHAQYMATGDWERAARLLVLHGRIGDALR
LVAKEGKLSSVWLAYAPMAGSDVWREFTFLYAKQLRNARAFQDAALHYTSVGDVHTAIEC
LCDGQLWREALALVHLRCSPFDPVRTATYEALASHLQATHAVEEAGHVYVHLDQPDQALA
CFLKAASPSSFDAAARLPLSNSVALDLANRAMVLGFDSAVAILLAALPPESDPAAHLFLA
FYLRSKSPPSCSMVSNQALAHSLLAQRPEGLPPLLTEHLTDGGWFWTALDAPDIASRLRD
ADEDEVRESIEKTFGVYLQAAPVHGRILAHLLRIGTDVAQGCLVSAFETWSATLAWLLST
TEGCELLGAFCLVFPRGVQRQPITDGELGTEPSATQELWALFFLYQCIALARTVRLEADT
DPLASQGSLLFLIQWINNELPVVQLETLGADVTQLTRTASNELSLLYHQLLATPSGESPG
SEDVASASDQDDEQGSTPDVVDE
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgatcgaccgccagcgaaagcacaagaccgaaatcatggccatcgcaagcgccgagggc
cacacaatcgttgcgggcgaccgcaacggcgtcctgagcgtctggcaccgcgacactggc
atcgcgacgctggccacgccgatcgctggcgactgcatctactgtcttcacgtcgccggt
ggacaggttgccattggctatcggagcggcaaagtgatcctctgggatttgcaccacggc
gcaatcacgacgcgcctcaaaggtcatgaagaggaagtgcacgctgtctcgtggtttacc
gcggccgatggcaagctcttgcttgcaacgtcgtcgcgcgacaagaagctgtgcgtctat
gacggcgacaatgtcatcatggaaagtcaactgcccaagccaaagaaagccataagtgcg
caccagctcggacgtctctggttcacgcacgcgtggatcccaggcgcggaggccgatgct
gtgcgtctcgtgacgagctcgtacaacggcgagctctacagttgggagtggtccctctcg
aagaagcgccccaagctcagcgtggcgccgacgatcgtcaagcaaggccacacacgcccc
attttcaacattgccgcgctctcgctcagccctgcgagtacgtacatcatcaccgtctcg
atggaccgcgacgtgcgcgtgctccatgcgccctcgatgacatcgcacagcaagctcgca
ggtctcggtggtcacgtctacacgcttcagctcaacgccagcggtgtcttggctgcgggg
attggcgacaacactattcgcttggtccgggatgtgcaatcgccgcagacgacgtgcgac
ctggtgtggaaaggcctccaaagcaaggtcacggcattggcatggcatccgattagcccc
acgatccttgcgtatggctgtgaagacggcgctgttggctactacgacacttcttcgcac
cagcacacccgtttcaaggcataccaaaaaggcatgattcaccaagttgcttggcgcgct
ccggcgacgatggatgccgcaccggaacaagattggctggtagcgctcgaggcggtcgaa
cacggcgagcgtgacgtaatggaggctacggttgcaagcccttcgagctcggcacttcag
ctttggatttgcgctggcgacgggacgctgacggtcgccaacccagagaagtccgatgcg
ccgatgaaggctgtgaacaagcgctggggtgtccacaatgtcacgagctttgcgtggcag
ccagactcggtcacttgcgccgtcgggaccaaggacgggatcgtgcatctcgtcgtcaac
gatgacaaagcgcaccagtacatggaccacagcaaaaccgtatcgtgcgttaagtggtgc
cggtccacgctcgtgacggcgtcgtacgatggctcggtgtgcgtgtatgattttacaagt
gagcgtccccaggcgccggcgcgcgtctttaagggtcatgcgacgggcgtcacgtgcatt
gcgtggtcgccgtcgacagagtacctggcgtcggcatcgatggatggcaccgtgcaagtg
tggccgcaaagcggcgaccgcggcttcaactttcggggacatacgggccgcgtcttgaca
gttgcgtgggtcgacgacgagactcttgtgagtgctggcgaagaccagtcgatccgcgcg
tgggcgtacgctgaccagacatgcactcttccgcccaagagcaaagacgactcggcgccg
gctccagctcccgtcgtcacgagtaaaaaggcggtacccaagcagcccaagacgctagcc
gccgtggctggtttgctgccaaaagccgataccaacgtcgaaagtgttgtgaaaatgctc
gatccgcccgcgagtgtcgctatgctggacgacgcacatgcgcagtacatggcgacgggc
gactgggaacgcgcggcaagactgctcgtgctccacggacgcattggtgatgccctgcgc
cttgtcgcaaaagaaggaaagctcagctccgtctggctggcctacgcgccaatggccggt
agcgacgtgtggcgcgagtttacattcttgtacgccaagcagctccgcaatgcccgcgcc
tttcaggacgcagcgttgcactacacgtcggtcggggacgtccacacagcgatcgagtgt
ctctgtgacggtcagttgtggcgcgaagccctcgccctcgtgcatctgcgctgttctccg
ttcgatccagtgcgaaccgccacgtacgaagctctggcgagccacttgcaagcaacacac
gcggtcgaagaagcgggacatgtgtacgtgcacctggaccagccggaccaagctctcgct
tgcttcctcaaggccgcgtcgccatcttcgtttgatgcagctgcgcgtctcccgctgtcc
aactcggtggccctcgacttggccaaccgagcgatggtgcttggattcgactcggccgta
gcgatccttttggcggcgctgccgcccgagtcagaccccgccgcgcatctctttttggcg
ttctacctgcgctcaaagtcgccaccgtcgtgctccatggtctcaaaccaagcgctggcc
cacagtctcttggcccaacgtcccgaaggcttgccgccgttgttgacggagcacttgacc
gacggcggctggttctggaccgcgctcgatgcacccgatatcgcgtcgcggttgcgtgac
gcggacgaggatgaggtgcgcgagtcgatcgaaaagacctttggtgtctacttgcaggcg
gcgcccgttcatggccgcattctggcacatctcttgcgcattggcacggatgtggcacaa
gggtgccttgtgagtgcatttgaaacgtggagcgcaacgttggcgtggctgctttcgacg
acagagggatgcgagctcctcggtgctttctgcctcgtctttcctcgcggtgtgcaacgc
cagcccattaccgatggcgagctcggtacggagcctagcgctacgcaagagctctgggcg
ctcttcttcttataccagtgcattgctctcgcccgcaccgtgcgcctcgaggccgacaca
gacccgctggccagtcaaggctcgctactgtttctcatccagtggatcaacaacgagttg
ccggtcgtgcaactagaaaccctcggagccgatgtgacccagctaacgcgaacggcgtcc
aacgagctctcgctgctgtaccaccaactcttggcaacgccttctggcgaaagcccagga
agcgaagacgtggccagtgccagcgaccaagacgacgagcaaggctccacaccggacgtt
gtcgacgaatag

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