Saprolegnia parasitica: SPRG_07502
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Entry
SPRG_07502 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K13133
gem associated protein 5
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_07502
03041 Spliceosome [BR:
spar03041
]
SPRG_07502
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPRG_07502
mRNA cycle factors
P-body specific factors
SPRG_07502
Spliceosome [BR:
spar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
SPRG_07502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR5
TPR_GEMI5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
BBS2_Mid
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
B-prop_COPA_B_2nd
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_VPS8
PALB2_WD40
tify
Beta-prop_WDR75_1st
TPR_1
Motif
Other DBs
NCBI-GeneID:
24129774
NCBI-ProteinID:
XP_012202030
UniProt:
A0A067C9V2
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MIDRQRKHKTEIMAIASAEGHTIVAGDRNGVLSVWHRDTGIATLATPIAGDCIYCLHVAG
GQVAIGYRSGKVILWDLHHGAITTRLKGHEEEVHAVSWFTAADGKLLLATSSRDKKLCVY
DGDNVIMESQLPKPKKAISAHQLGRLWFTHAWIPGAEADAVRLVTSSYNGELYSWEWSLS
KKRPKLSVAPTIVKQGHTRPIFNIAALSLSPASTYIITVSMDRDVRVLHAPSMTSHSKLA
GLGGHVYTLQLNASGVLAAGIGDNTIRLVRDVQSPQTTCDLVWKGLQSKVTALAWHPISP
TILAYGCEDGAVGYYDTSSHQHTRFKAYQKGMIHQVAWRAPATMDAAPEQDWLVALEAVE
HGERDVMEATVASPSSSALQLWICAGDGTLTVANPEKSDAPMKAVNKRWGVHNVTSFAWQ
PDSVTCAVGTKDGIVHLVVNDDKAHQYMDHSKTVSCVKWCRSTLVTASYDGSVCVYDFTS
ERPQAPARVFKGHATGVTCIAWSPSTEYLASASMDGTVQVWPQSGDRGFNFRGHTGRVLT
VAWVDDETLVSAGEDQSIRAWAYADQTCTLPPKSKDDSAPAPAPVVTSKKAVPKQPKTLA
AVAGLLPKADTNVESVVKMLDPPASVAMLDDAHAQYMATGDWERAARLLVLHGRIGDALR
LVAKEGKLSSVWLAYAPMAGSDVWREFTFLYAKQLRNARAFQDAALHYTSVGDVHTAIEC
LCDGQLWREALALVHLRCSPFDPVRTATYEALASHLQATHAVEEAGHVYVHLDQPDQALA
CFLKAASPSSFDAAARLPLSNSVALDLANRAMVLGFDSAVAILLAALPPESDPAAHLFLA
FYLRSKSPPSCSMVSNQALAHSLLAQRPEGLPPLLTEHLTDGGWFWTALDAPDIASRLRD
ADEDEVRESIEKTFGVYLQAAPVHGRILAHLLRIGTDVAQGCLVSAFETWSATLAWLLST
TEGCELLGAFCLVFPRGVQRQPITDGELGTEPSATQELWALFFLYQCIALARTVRLEADT
DPLASQGSLLFLIQWINNELPVVQLETLGADVTQLTRTASNELSLLYHQLLATPSGESPG
SEDVASASDQDDEQGSTPDVVDE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgccagcgaaagcacaagaccgaaatcatggccatcgcaagcgccgagggc
cacacaatcgttgcgggcgaccgcaacggcgtcctgagcgtctggcaccgcgacactggc
atcgcgacgctggccacgccgatcgctggcgactgcatctactgtcttcacgtcgccggt
ggacaggttgccattggctatcggagcggcaaagtgatcctctgggatttgcaccacggc
gcaatcacgacgcgcctcaaaggtcatgaagaggaagtgcacgctgtctcgtggtttacc
gcggccgatggcaagctcttgcttgcaacgtcgtcgcgcgacaagaagctgtgcgtctat
gacggcgacaatgtcatcatggaaagtcaactgcccaagccaaagaaagccataagtgcg
caccagctcggacgtctctggttcacgcacgcgtggatcccaggcgcggaggccgatgct
gtgcgtctcgtgacgagctcgtacaacggcgagctctacagttgggagtggtccctctcg
aagaagcgccccaagctcagcgtggcgccgacgatcgtcaagcaaggccacacacgcccc
attttcaacattgccgcgctctcgctcagccctgcgagtacgtacatcatcaccgtctcg
atggaccgcgacgtgcgcgtgctccatgcgccctcgatgacatcgcacagcaagctcgca
ggtctcggtggtcacgtctacacgcttcagctcaacgccagcggtgtcttggctgcgggg
attggcgacaacactattcgcttggtccgggatgtgcaatcgccgcagacgacgtgcgac
ctggtgtggaaaggcctccaaagcaaggtcacggcattggcatggcatccgattagcccc
acgatccttgcgtatggctgtgaagacggcgctgttggctactacgacacttcttcgcac
cagcacacccgtttcaaggcataccaaaaaggcatgattcaccaagttgcttggcgcgct
ccggcgacgatggatgccgcaccggaacaagattggctggtagcgctcgaggcggtcgaa
cacggcgagcgtgacgtaatggaggctacggttgcaagcccttcgagctcggcacttcag
ctttggatttgcgctggcgacgggacgctgacggtcgccaacccagagaagtccgatgcg
ccgatgaaggctgtgaacaagcgctggggtgtccacaatgtcacgagctttgcgtggcag
ccagactcggtcacttgcgccgtcgggaccaaggacgggatcgtgcatctcgtcgtcaac
gatgacaaagcgcaccagtacatggaccacagcaaaaccgtatcgtgcgttaagtggtgc
cggtccacgctcgtgacggcgtcgtacgatggctcggtgtgcgtgtatgattttacaagt
gagcgtccccaggcgccggcgcgcgtctttaagggtcatgcgacgggcgtcacgtgcatt
gcgtggtcgccgtcgacagagtacctggcgtcggcatcgatggatggcaccgtgcaagtg
tggccgcaaagcggcgaccgcggcttcaactttcggggacatacgggccgcgtcttgaca
gttgcgtgggtcgacgacgagactcttgtgagtgctggcgaagaccagtcgatccgcgcg
tgggcgtacgctgaccagacatgcactcttccgcccaagagcaaagacgactcggcgccg
gctccagctcccgtcgtcacgagtaaaaaggcggtacccaagcagcccaagacgctagcc
gccgtggctggtttgctgccaaaagccgataccaacgtcgaaagtgttgtgaaaatgctc
gatccgcccgcgagtgtcgctatgctggacgacgcacatgcgcagtacatggcgacgggc
gactgggaacgcgcggcaagactgctcgtgctccacggacgcattggtgatgccctgcgc
cttgtcgcaaaagaaggaaagctcagctccgtctggctggcctacgcgccaatggccggt
agcgacgtgtggcgcgagtttacattcttgtacgccaagcagctccgcaatgcccgcgcc
tttcaggacgcagcgttgcactacacgtcggtcggggacgtccacacagcgatcgagtgt
ctctgtgacggtcagttgtggcgcgaagccctcgccctcgtgcatctgcgctgttctccg
ttcgatccagtgcgaaccgccacgtacgaagctctggcgagccacttgcaagcaacacac
gcggtcgaagaagcgggacatgtgtacgtgcacctggaccagccggaccaagctctcgct
tgcttcctcaaggccgcgtcgccatcttcgtttgatgcagctgcgcgtctcccgctgtcc
aactcggtggccctcgacttggccaaccgagcgatggtgcttggattcgactcggccgta
gcgatccttttggcggcgctgccgcccgagtcagaccccgccgcgcatctctttttggcg
ttctacctgcgctcaaagtcgccaccgtcgtgctccatggtctcaaaccaagcgctggcc
cacagtctcttggcccaacgtcccgaaggcttgccgccgttgttgacggagcacttgacc
gacggcggctggttctggaccgcgctcgatgcacccgatatcgcgtcgcggttgcgtgac
gcggacgaggatgaggtgcgcgagtcgatcgaaaagacctttggtgtctacttgcaggcg
gcgcccgttcatggccgcattctggcacatctcttgcgcattggcacggatgtggcacaa
gggtgccttgtgagtgcatttgaaacgtggagcgcaacgttggcgtggctgctttcgacg
acagagggatgcgagctcctcggtgctttctgcctcgtctttcctcgcggtgtgcaacgc
cagcccattaccgatggcgagctcggtacggagcctagcgctacgcaagagctctgggcg
ctcttcttcttataccagtgcattgctctcgcccgcaccgtgcgcctcgaggccgacaca
gacccgctggccagtcaaggctcgctactgtttctcatccagtggatcaacaacgagttg
ccggtcgtgcaactagaaaccctcggagccgatgtgacccagctaacgcgaacggcgtcc
aacgagctctcgctgctgtaccaccaactcttggcaacgccttctggcgaaagcccagga
agcgaagacgtggccagtgccagcgaccaagacgacgagcaaggctccacaccggacgtt
gtcgacgaatag
DBGET
integrated database retrieval system