KEGG   Saprolegnia parasitica: SPRG_07604
Entry
SPRG_07604        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
spar  Saprolegnia parasitica
Pathway
spar03030  DNA replication
spar03410  Base excision repair
spar03420  Nucleotide excision repair
spar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRG_07604
   03410 Base excision repair
    SPRG_07604
   03420 Nucleotide excision repair
    SPRG_07604
   03430 Mismatch repair
    SPRG_07604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spar03032]
    SPRG_07604
   03036 Chromosome and associated proteins [BR:spar03036]
    SPRG_07604
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_07604
DNA replication proteins [BR:spar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPRG_07604
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPRG_07604
Chromosome and associated proteins [BR:spar03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPRG_07604
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPRG_07604
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPRG_07604
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_lid_RFC1 Sigma54_activ_2 Rad17 AAA_16 AAA_22 ABC_tran AAA_27 nSTAND_NTPase5 Rep_fac_C nSTAND1 Ring_hydroxyl_B ATPase_2 DUF87 AAA_5
Other DBs
NCBI-GeneID: 24129867
NCBI-ProteinID: XP_012202279
UniProt: A0A067CCH5
LinkDB
Position
Unknown
AA seq 352 aa
MLWVDAHRPTSLDRLDFHAPISDRLKRLAASEELPHLLIYGPSGAGKKTRVMALLKELYG
PNALKTRLEHKTFKHPTQSKKVEITTVASNYHIEMNPSDVGNDDRLVVQEVIKEIAMYRL
ADTNAQKQFKVVVLVEVDQLSKAAQHALRRTMEKYTGSCRLILCCNSPSKVIDPLRSRCL
GIRIGAPTHDEIVSVLQKVCVKENLSFCAPLAMEIAKKSERNLRRALLMLETCRVQNYPF
MADQPIPLPEWEEYIAGLAKDVLQEQSPGSLLKARDKLYELLSNCIPSDIILKVLLRELT
CRLDDDLKHELAHYAAYYEHRLQCGQKAIFHLEAFLAKFMTIYKKFLLDFYM
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgctgtgggtcgacgcgcaccgcccgacgagcctcgaccgcctggacttccatgcgccg
atcagcgaccgcctcaagcgcctagcggcctcggaagagctgccccatctgctcatctat
gggccctcgggcgcgggcaagaagacccgcgtcatggcgctcctcaaggagctctacggc
cccaacgcgctcaagacgcgcctcgagcacaagacgttcaagcacccgacgcagtccaag
aaggtcgagatcacgacggtcgcctccaactaccacattgagatgaacccctccgacgtt
ggcaacgacgaccggctcgtcgtccaagaggtcatcaaggaaatcgccatgtaccgcttg
gccgacacgaacgcgcaaaagcagttcaaggtcgtcgttctcgtcgaagtcgaccagctc
tccaaggccgcgcagcatgcattgcgtcgcacgatggaaaagtacacgggctcctgccgc
ctcatcctctgctgcaacagcccgtccaaggtgattgacccgctgcgctcgcgttgcctg
ggcatccgcatcggcgcgccgacgcacgacgagattgtcagcgtcctgcaaaaggtctgc
gtcaaggagaacctctcgttctgcgcgccgctggccatggagatcgcgaaaaagtcggag
cgcaacctgcgccgcgccttgctcatgctcgagacctgtcgcgtccaaaactacccgttc
atggccgaccagccgatcccgctgcccgagtgggaagagtacattgccggtctcgccaag
gacgtgctccaggaacagagtcccggcagcctcctcaaggcccgcgataaattatacgag
ctcctctccaactgcattccgtccgacatcatcctcaaggtgcttcttcgcgagctcacg
tgccggctcgacgacgacctcaagcacgaactcgcccactacgccgcctactacgagcac
cgcctccagtgcggccagaaggccatcttccacctcgaagcgttcctcgccaagtttatg
accatctacaagaaattcctcctcgacttttacatgtaa

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