KEGG   Saprolegnia parasitica: SPRG_08536
Entry
SPRG_08536        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
spar  Saprolegnia parasitica
Pathway
spar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPRG_08536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_08536
Enzymes [BR:spar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     SPRG_08536
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     SPRG_08536
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 CbiA AAA_29 nSTAND3 AAA_16 ATP_bind_1 AAA_18
Other DBs
NCBI-GeneID: 24130752
NCBI-ProteinID: XP_012203168
UniProt: A0A067CAL2
LinkDB
Position
Unknown
AA seq 439 aa
MNTSADEPAPERVYLKPNCEFRFEVQGADDVLIRLKSGTAELFGAELAKEKDYRFRKCQL
AIFTWHGCELLVTGKCSVSYTSDETPMASIINIHTQLDRMRCDAWNVKGCGPRVLITGPT
DSGKSTVTRILLNYALRMGRKPTFVDLDVAHGLLSVPGTIAATPLETNCMSVEDDFVLTA
PLAYYFGHTTLKDISELYKFQASELAKRVDQRLANDAEVNAAGIIVNTSGSIDNEGYQAL
VHCIQAFRIDLVIVLGQDRLFSELSSAVSPSTSVIKLPRSDGVVQRSNQLRHQLRMDGCH
AYFYGKKIPNAAPMQSLYEYSPHVVELSFEDINIYRVHDLTVSDVMLPVGQVDDLQRLRV
LPVEKTVDLAHCIAAVIHKSSIKDDDIGMDPQSLLAASAAGFVQIKAVNVQTSKITLLVP
CHGPLPSKNLVVGSLKFME
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaacaccagcgcagacgagcccgcgccggagcgcgtgtacctcaagcccaactgcgag
ttccgcttcgaggtccagggcgccgacgacgtcctcatccgcctcaagtcggggaccgcc
gagctctttggcgccgagctggccaaggagaaagactaccgcttccgcaagtgccaactg
gccatcttcacgtggcatggctgcgagctcctcgtcacgggcaagtgctccgtgtcgtac
acctcggacgagacgccgatggcctcgatcatcaacatccacacgcagctcgatcgcatg
cgctgcgacgcttggaacgtcaagggctgcgggccgcgcgtgctcattacgggcccgacc
gactcgggcaagtcgaccgtcacgcgcatcctcctcaactatgcgctgcgcatgggccgc
aagccgacgtttgtcgacttggacgtggcgcatggtctgctgagtgttcccgggacgatt
gccgcgacgccgctcgagaccaactgcatgagcgttgaagacgactttgtcttgacggcg
ccattggcatactattttggccacacgacgctcaaggacatttcagaattgtacaagttt
caagcgtcggagctggccaagcgcgtggaccagcgcctcgccaacgacgctgaagtcaac
gccgcgggcatcatcgtcaacacgtcgggctcgattgataatgaaggctaccaagcactc
gtgcactgcatccaggcgttccgcatcgacctcgtcatcgtcctgggtcaagatcggttg
ttcagcgaattgagctcggccgtgtcgccgtccacgtccgtcatcaaactgccgcgctcg
gatggcgtcgtccaacgctccaaccagcttcggcaccagcttcgcatggacggctgccat
gcctacttttacggcaagaaaatcccaaacgcggcgccgatgcagtcgctctacgagtac
tctccccacgtcgtcgagctgtcgtttgaagacatcaacatctaccgcgtgcacgacttg
accgtctcggacgttatgctgcccgtgggccaagtcgacgacttgcagcggctgcgcgtg
cttccggtcgaaaagactgtcgacttggcgcactgcattgcggcggtcatccacaagtcg
agcatcaaggacgacgacattggcatggacccgcagtcgctcctcgccgcgagtgccgct
ggctttgtccaaatcaaagcggtgaacgtccaaacgagcaagatcacgctgctcgtgccc
tgccacggcccgcttccgtccaagaacctcgtcgttggctcgctaaagtttatggagtaa

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