Saprolegnia parasitica: SPRG_08991
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Entry
SPRG_08991 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_08991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_08991
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_08991
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPRG_08991
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SPRG_08991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
24131190
NCBI-ProteinID:
XP_012203502
UniProt:
A0A067CFZ0
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MAFRGFTQPATGGFGFGAPAQPATGFGATQPSTGFGGFGAAPATGAASPFGAAPAAASPF
GGGANSSPAFGTSSTFGASTTNAFGAPAATSAFGNTSAGTNVGFGGFGAAPQQQQQTSAF
GAAAAPAASPFGPTPTTSTAAASPFGGGMFGAAAPKPAFGTGGFGSTTTTSTFGATSAPG
AFGAPAQQTSAFGAPASTGFGATTGFGAQQSNGFGAAPSAFGAPAQQTSAFGGAAASPFG
AAPATTSAFGAAPTSAFGGGGFGAQANSAPQCGTGNPPYVTSSEQEAEKNKPATTVHFQS
ISKMPQYQHKSVEELRWEDYLKRTDPAAAQQQANLVPNTGAAAPTTTTTTTGFGGFGAAT
TTAPGAFGAKPPLGGGGFGSTTTSAFGAAPSTGFGSQQTSAFGAQPAAPSAFGTGGFGSQ
QPATGGFGSTTTNSMFGGATTSAFGAQPAQQQQPTSAFGGFGANTNTNTTTSGFGTASPG
GAFGAGGFGSQQPATGGFGSTTTTTAGAFGGFGQASTTAPAQTNNAFGGSNNAFSFAKPS
TPAAGAFGSAPSAGGFSFGATPSTAPATGGLFGASSSTNTTTSGFGSFGATKPQTSTFGG
FGATTTTTPATGGFGAPTTGTSMFGGASGSTTPAPFSFGGSNTGTTGFGSTTGTSLFNKP
AATGGATSAFGSSLFSAPGGGFGAPNQTASTGGFGQPAAPAAPTTLVAGHDSNPYGAGSF
GAGLIEQQIKTTLTLPVPNAMPRAKAVDAVEYQRPSSLVRPVATVPTFLSVPKTTVSAPT
PARRLLDDTASAPAADFSFATTKFKSIATKQLNIDTPPKVRRVPPPTTAPHVIPAETEAS
SATATVSLSISLPSKTTLELVVDSLATGADVRALIGEKAGLTGAFDVQFDGTPINASMTA
ASFVHGSLEVVAAQPFVSFDSFYKSATSASTSEFASPAENPLAPTLTKEGYYTMPDLALL
RTMTTKELQSVDNFAVGCKGLGCVQWYGATDVTNLNLDDLVLFSTREVVVYPDEDNKHAL
GSGLNRPALVELLQVYPPTQDAKREKYIERVIARTETMDATHVDYNPDAGVWKFRVEHFS
RYGLDDDESDDDATATTDATGLQQVATQLQLNPHRLHELSALYLPSEPEKIVTPVPTLSA
SRLAVVEPVPATPSAPVPRSLTVYPVVTPSTSTLLGLWNAPLKSLDLGIFLGRSFRASFG
PQGQLVTTHAAQRVSIYTRTPATGTALLAAHRSVSRQDPVSFHMTLPADVSGLLSGFTSA
ATGHDGLLWGLVAALYGQESSSSSGATAPYLAPISNAPLSLNDLATSDRRHAYLSQWFEK
AVARPTSSSLPSLHNVLSLLCQHRLVEAATMAASLGNFRLATLIAQASTHRDGDFRAALL
QQLEAWATTEALQFMEPELAWIYSLLAGSFAVVTQRLSHLDWLQSLAIVFWFAQGPQSLA
SAVDTFTRAVAAQQCKPPLLHLKADPIMELLDVAVGAKASLVPLLNVLEPDAAWHLYHVL
SHVPGQSLCLSPKQAALLTSNYISTLIDAGRVTDAIYVGLTIHDVRARKATVLSLLHTAA
AKDGALTSLQGLVPTEWFHDAMATTAMATAAYASAVDHYMLAGNFDHAHRVLMLHVAIPR
LFRGETAELGSTLQALEPHQAAMPLWARYGAVVLSYLRLRESPHIATRHVVLSVCRKLKE
WQMQPLAHLGHEHALIERAVLANMLTYMTSTAVALEQALDASASGQWLNQLQGYVQADCF
GEGFRATSLMHVSASLVE
NT seq
5278 nt
NT seq
+upstream
nt +downstream
nt
gatggcgttcagagggtttacgcagcccgcgaccggcggctttggcttcggcgcgcccgc
gcagcccgcgaccggctttggcgcgacgcaaccttcgactggctttggcggctttggcgc
tgcgcccgcgaccggcgcggcctctccgttcggcgctgccccggcggccgcgtcgccctt
tggtggcggtgccaactcgtcgccggcctttggcacgtccagcacctttggcgcgagcac
gacaaacgcgttcggagcgcctgccgcgacgtcggcctttggcaacacatcggcgggcac
gaacgtcggctttggcggctttggcgccgcgccccagcaacaacaacaaacatcggcctt
tggcgctgccgcggccccggccgcgagcccgttcggcccgacgccgacgacctccaccgc
cgccgcgagtccgtttggcggtggcatgtttggcgctgccgcccccaagcctgcgttcgg
gacgggcggtttcggcagcacgacgacgaccagcacgttcggcgcgacctcggcccccgg
tgcatttggcgcgcctgcgcagcagacgtcggcctttggtgcaccggcgtcgacgggctt
tggcgcgaccactggctttggcgcgcagcaatcgaatggctttggcgcggccccgagcgc
ctttggagcccccgcgcagcaaacgtcggcctttggaggcgcggctgcgagcccatttgg
cgctgcgcctgcgacgacgtcggcctttggcgctgcgcccacatctgcgtttggcggcgg
tggctttggcgcccaggccaacagcgcgccgcagtgcggtacgggcaacccgccgtacgt
tacgtcgtccgagcaagaggccgagaagaacaagcccgcgacgacggtccacttccagtc
gatctccaagatgccgcagtaccagcacaagtcggtggaggagctccgatgggaagacta
cctcaagcgcaccgaccccgctgccgcgcagcaacaggccaacttggtgcccaacacggg
cgctgccgctccgacgacgacgacgacgaccacgggctttggtggtttcggcgcagcgac
aacgaccgcgcccggcgcgtttggtgccaagccgccgctcggtggcggtggctttggtag
cacgaccacgtctgcgtttggcgccgcaccgtcgaccggctttggctcgcagcagacgtc
ggccttcggagcgcaaccggcggcgccgtcggcattcggtaccggcggcttcgggtcgca
gcagccggcgaccggcgggtttggctcgacgaccacgaacagcatgtttggcggtgcgac
gacgtcggcctttggtgcgcagccggcgcagcagcagcagccgacgtcggcgttcggagg
tttcggcgccaacacgaacacgaatacgacgacatcgggctttggcactgcgtcgcccgg
cggtgcgtttggcgccggtggctttgggtcgcagcaaccggcaaccggcggctttggctc
gacaacgacgacgacggccggtgcttttggcgggtttggccaagcgtcgacgaccgcgcc
ggcgcaaaccaataatgcgtttgggggcagcaacaacgcgttcagctttgccaagccgtc
gacgccggcggccggtgcatttggctcggcgccgagtgcgggtggctttagctttggcgc
gacgccgtccacggcgccggcgacgggcgggctctttggcgcctcgagttcgaccaacac
gaccacaagtggttttggctcgttcggcgcgaccaagccgcagacatcgacgttcggtgg
ctttggcgcgacgacgacgacgacgccggccaccggtggctttggcgcaccgacgacggg
cacctcgatgtttggcggcgcctcggggtccacgacaccggctccgtttagctttggcgg
cagcaacaccggcaccaccggctttggatcgaccaccggcacgagtctcttcaacaagcc
cgcggccacgggcggcgcgacgtcggcatttggctcgtcgcttttctcggcaccgggcgg
tggctttggcgcgcccaaccaaacggcgtcgaccggcggctttggccagccggcggcccc
cgcggctccgacgacgcttgtcgcgggccacgactcgaacccgtacggcgccggttcgtt
tggcgcgggcctcattgagcagcagatcaagacgacgctgacgctgcctgtgcccaacgc
gatgccgcgcgccaaggccgtcgacgcggtcgagtaccagcgcccgtcgtcgctcgtgcg
cccggtcgcgaccgtcccgacgtttttaagtgtgcccaagacgacggtgtcggcgccgac
gcccgcgcgccgcctgctcgacgacacggccagtgcaccggccgccgactttagctttgc
gacgaccaagttcaagagcattgcgaccaagcaactcaacattgacacgccgccgaaagt
gcgccgggtgccgccgccgacgaccgcgccgcatgtgattccggccgagaccgaggcgtc
gtcggcgacggcgaccgtgtcgctttccatctcgctgccgtccaagacaacgctcgagct
cgtcgtcgacagcctcgcgaccggtgccgacgtccgcgcgctcattggcgaaaaagccgg
tctcaccggcgcctttgacgtgcagtttgacggaacgccgatcaacgcgtcgatgacggc
ggcgtcgttcgtacacgggtcgctcgaggtcgtggccgcccagccgtttgtgagttttga
ctcgttttacaagtcggcgacgagcgcgtcgacgtcggagtttgcgtcgccggccgagaa
cccgttggcgccgacgctgacgaaagaaggctactacacgatgccggacctggcgcttct
tcgcacgatgacgaccaaggagctccagagcgtcgacaactttgcggtcggctgcaaggg
cctcgggtgcgtgcagtggtacggcgcgacggacgtgaccaacctcaacttggacgatct
cgtcttgttttcgacgcgggaggtggtcgtgtatccggacgaagacaacaagcacgcgct
gggcagtggcctcaaccggcccgcgctcgtcgagctcctccaggtgtacccgccgacgca
ggacgccaagcgtgaaaagtacattgagcgcgtcattgcgcgcaccgaaaccatggacgc
gacgcacgtcgactacaacccggacgcgggcgtgtggaagttccgcgtcgagcactttag
ccggtacggcctcgacgacgacgagagcgacgacgatgcgacggccacgaccgacgccac
ggggttgcagcaggtcgcgacgcagctgcagctcaacccgcaccggttgcacgaactctc
ggccttgtatctgccgtcggaaccggagaagatcgtgacgccggtcccgacgctctcggc
cagtcgcctcgcggtcgtcgaaccggttcctgcgacgccgtcggcacccgtgccccggtc
gctcaccgtgtaccccgtggtgacgccgtcgacgtcgacgctccttggcctctggaacgc
gccgctcaagtcgctcgaccttggtatctttctcgggcggtcgtttcgcgcgtcgtttgg
gccgcagggccaacttgtgacgacgcacgcggcgcagcgggtctcgatctacacccggac
gccggcgacggggacggcccttctggcggcgcaccgcagcgtcagtcgccaagaccccgt
gtcgttccacatgacgctgccggccgacgtgtcggggctcctctccgggtttacatcggc
ggcgacgggccacgacggtctcctctggggtctcgtggcggccttgtacggccaagagtc
gtcgtcgtcgtcgggtgctacggccccatacttggctccgatctcgaatgcgccgttgtc
cttgaacgatctcgcgacgtcggaccgtcgccacgcgtatctctcgcagtggtttgaaaa
ggccgtggcgcgcccgacgtcgtcgtccttgccgtcgctccacaacgtgctctcgctctt
gtgccagcaccgcctcgtggaggctgcgacgatggccgcgtcgctcggcaactttcgctt
ggcgacgctgattgcacaagcctcgacgcaccgggacggggactttcgcgccgcgctctt
gcagcagctcgaagcgtgggcgacgacggaggcgcttcagtttatggagcccgagctcgc
gtggatctactcgctcttggccggctcgtttgcagtcgtgacgcagcgtctgtcgcacct
cgactggctccaatcgctcgcgatcgtgttttggtttgcccaaggcccgcagtcgcttgc
gtctgcggtcgatacgttcacgcgcgcggttgcggcccagcagtgcaagccgccgctcct
ccatctcaaggcggacccgatcatggagctcttggacgttgcggtcggcgcgaaagcgtc
cttggtcccgctgctcaacgtgctcgagcccgacgcggcgtggcacctctatcacgtcct
ctcgcatgtgcccggtcagtcgctgtgcctgtcgcccaagcaagccgcgcttctcacgtc
caactatatctcgacgctcatcgacgcggggcgtgtcacggacgccatctacgtcggctt
gacgatccacgatgttcgtgcgcgcaaggccacggtgctctcgctcctgcacacggcggc
ggccaaggacggtgccttaacgtcgctccaaggcctcgtgccaaccgagtggtttcacga
tgcgatggcaaccaccgcgatggcgacggccgcgtacgcgtcggcggtcgaccactacat
gcttgcgggcaactttgaccacgcgcaccgcgtgctcatgctccacgtggcgattccccg
cctcttccggggcgagacggccgagctcggcagcacgctccaggcgctcgagccgcacca
agcggcgatgcctctctgggcccggtacggcgccgtcgtgctgagctacctccggctccg
cgagagcccgcacattgcaacgcgccacgtggtgctgagcgtctgccgcaagctcaaaga
gtggcaaatgcagccgctggcgcacctcgggcacgagcacgcactcatcgagcgcgctgt
cttggccaatatgctcacgtacatgacgtcgacggcggtcgcgctcgagcaggcgttgga
tgcgtcggcgtccgggcagtggctcaatcagctgcagggctacgtgcaagccgactgctt
tggcgaaggcttccgcgccacgagcctcatgcacgtcagcgcgtcgctcgtcgagtag
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integrated database retrieval system