Saprolegnia parasitica: SPRG_09629
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Entry
SPRG_09629 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K13114
pinin
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_09629
03015 mRNA surveillance pathway
SPRG_09629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_09629
03041 Spliceosome [BR:
spar03041
]
SPRG_09629
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPRG_09629
Spliceosome [BR:
spar03041
]
Complex C
Other components
EJC/TREX
SPRG_09629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
24131783
NCBI-ProteinID:
XP_012204445
UniProt:
A0A067C2P2
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSETPTRRHAEGRRGSHDQNETPRNSKSIRDRIGERGAVADAASPRKRTAREPEGQGEEK
RRRVMRGGDGTAMPTDLLNGRRRLFGNLMGHLGKAKKQLAKDSDLLQKQDRLLSAADAKT
KEQSQRVQGLASQRSEQRRIETQISSLKRNASDSVAKLERQVTLSTKYERHYARFLQTVT
PIPIYYLPARHTKETQALVDASMEAVEEKIKLRRREFEVKKREIEADTKRKVDVLTAKLK
AVRTEGASPAKKTQTSSTDLPASETVGAMTSKDESSHDASRADAPTEDAHDKLDDEASET
VVDAPATPEQDDTRATTEQDDTAMTEENDTAMTEENDTAMTEENDTTMTEQDDTSAMIEQ
DDTAMAEQDNEAATEKGNEAASEHDDDATNDVTMTHEEDNDDVTVVDAPMEEATAEKSAL
VVSARTSKHAIGPVAKLKVVELRAYLKERDLDTKGLKAELADRLTDALALES
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgccgacgcgacgccatgccgagggccggcgaggtagccatgaccagaac
gagaccccgcgcaatagcaagagcatccgcgaccggatcggcgagcgtggcgccgtggcc
gatgctgcttcgccgcggaagcgcacggcgcgcgagcccgaaggacaaggcgaagagaag
cgccgacgtgtgatgcgcggcggcgacgggacggcgatgcccaccgacctcttgaacggg
cggcgtcgcttgtttgggaacctcatggggcacctcggcaaagccaagaagcagcttgca
aaggacagtgatttgctccagaagcaagatcggttgctctcggcggcggacgccaagaca
aaagagcagagccagcgcgtgcaaggcctcgcgtcgcagcgctcggagcagcgaaggatc
gagacgcagatctcgtcgctcaagcgcaatgcgagcgacagcgtcgccaagctcgagcga
caagtcacgctcagcacaaaatacgagcgccattacgcgcggttcctccagacagtcacg
ccgatcccgatctactaccttcctgcgcgccacaccaaggagacgcaagcccttgtcgac
gcgtccatggaggccgtcgaagagaagatcaagctccgtcgacgagagtttgaggtcaag
aaacgcgagattgaagccgacacgaagcgcaaggtggacgtgctcaccgccaagctcaag
gcagtgcgcaccgaaggagcgtcgcccgcaaagaagacacaaacgtcctcgactgacctt
ccagcgtccgagacggtcggagccatgacctccaaggacgaaagcagccatgacgcgtct
cgggctgacgccccgacagaagacgcacacgacaagctcgacgacgaggcgagcgagacc
gtggtagatgcgcctgcaacgcctgagcaagacgacacccgcgccacgaccgagcaggat
gacactgccatgaccgaggagaatgacactgccatgaccgaggagaatgacactgccatg
accgaggagaatgacactaccatgaccgagcaagacgacaccagtgccatgatcgagcag
gatgacactgcaatggccgagcaagataacgaggcagccacggagaaaggcaacgaggca
gcctccgagcacgacgacgacgcgaccaacgatgttacgatgacacacgaagaggacaac
gacgatgtcacagtcgtcgacgccccaatggaggaggcgaccgcagagaagagcgcgctt
gtcgtctcggcgcggacctccaagcacgcgatcgggcccgttgccaagctcaaggtcgtc
gagctgcgtgcatatctcaaggagcgtgacctggacacgaagggtctcaaggccgagctc
gctgaccgcctcaccgatgcgttggccctcgagtcgtaa
DBGET
integrated database retrieval system