Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
|
Organism |
spar Saprolegnia parasitica
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:spar00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_09629
03015 mRNA surveillance pathway
SPRG_09629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:spar03019]
SPRG_09629
03041 Spliceosome [BR:spar03041]
SPRG_09629
Messenger RNA biogenesis [BR:spar03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPRG_09629
Spliceosome [BR:spar03041]
Complex C
Other components
EJC/TREX
SPRG_09629
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
472 aa
MSETPTRRHAEGRRGSHDQNETPRNSKSIRDRIGERGAVADAASPRKRTAREPEGQGEEK
RRRVMRGGDGTAMPTDLLNGRRRLFGNLMGHLGKAKKQLAKDSDLLQKQDRLLSAADAKT
KEQSQRVQGLASQRSEQRRIETQISSLKRNASDSVAKLERQVTLSTKYERHYARFLQTVT
PIPIYYLPARHTKETQALVDASMEAVEEKIKLRRREFEVKKREIEADTKRKVDVLTAKLK
AVRTEGASPAKKTQTSSTDLPASETVGAMTSKDESSHDASRADAPTEDAHDKLDDEASET
VVDAPATPEQDDTRATTEQDDTAMTEENDTAMTEENDTAMTEENDTTMTEQDDTSAMIEQ
DDTAMAEQDNEAATEKGNEAASEHDDDATNDVTMTHEEDNDDVTVVDAPMEEATAEKSAL
VVSARTSKHAIGPVAKLKVVELRAYLKERDLDTKGLKAELADRLTDALALES |
NT seq |
1419 nt +upstreamnt +downstreamnt
atgtccgagacgccgacgcgacgccatgccgagggccggcgaggtagccatgaccagaac
gagaccccgcgcaatagcaagagcatccgcgaccggatcggcgagcgtggcgccgtggcc
gatgctgcttcgccgcggaagcgcacggcgcgcgagcccgaaggacaaggcgaagagaag
cgccgacgtgtgatgcgcggcggcgacgggacggcgatgcccaccgacctcttgaacggg
cggcgtcgcttgtttgggaacctcatggggcacctcggcaaagccaagaagcagcttgca
aaggacagtgatttgctccagaagcaagatcggttgctctcggcggcggacgccaagaca
aaagagcagagccagcgcgtgcaaggcctcgcgtcgcagcgctcggagcagcgaaggatc
gagacgcagatctcgtcgctcaagcgcaatgcgagcgacagcgtcgccaagctcgagcga
caagtcacgctcagcacaaaatacgagcgccattacgcgcggttcctccagacagtcacg
ccgatcccgatctactaccttcctgcgcgccacaccaaggagacgcaagcccttgtcgac
gcgtccatggaggccgtcgaagagaagatcaagctccgtcgacgagagtttgaggtcaag
aaacgcgagattgaagccgacacgaagcgcaaggtggacgtgctcaccgccaagctcaag
gcagtgcgcaccgaaggagcgtcgcccgcaaagaagacacaaacgtcctcgactgacctt
ccagcgtccgagacggtcggagccatgacctccaaggacgaaagcagccatgacgcgtct
cgggctgacgccccgacagaagacgcacacgacaagctcgacgacgaggcgagcgagacc
gtggtagatgcgcctgcaacgcctgagcaagacgacacccgcgccacgaccgagcaggat
gacactgccatgaccgaggagaatgacactgccatgaccgaggagaatgacactgccatg
accgaggagaatgacactaccatgaccgagcaagacgacaccagtgccatgatcgagcag
gatgacactgcaatggccgagcaagataacgaggcagccacggagaaaggcaacgaggca
gcctccgagcacgacgacgacgcgaccaacgatgttacgatgacacacgaagaggacaac
gacgatgtcacagtcgtcgacgccccaatggaggaggcgaccgcagagaagagcgcgctt
gtcgtctcggcgcggacctccaagcacgcgatcgggcccgttgccaagctcaaggtcgtc
gagctgcgtgcatatctcaaggagcgtgacctggacacgaagggtctcaaggccgagctc
gctgaccgcctcaccgatgcgttggccctcgagtcgtaa |