Saprolegnia parasitica: SPRG_09944
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Entry
SPRG_09944 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_09944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_09944
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPRG_09944
Spliceosome [BR:
spar03041
]
Complex C
Other components
Step II factors
SPRG_09944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
ResIII
Flavi_DEAD
AAA_16
nSTAND3
UvrD-helicase
SLFN-g3_helicase
AAA_30
SRP54
T2SSE
ATPase
PhoH
AAA_11
AAA_7
Motif
Other DBs
NCBI-GeneID:
24132081
NCBI-ProteinID:
XP_012206088
UniProt:
A0A067C9C4
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MDAKKRREREWDAREAMAKVRASLPIFAWKKSILDTVRSSRVVIVVGETGSGKTTQIPQY
IFEAHMTNPSKKIAVTQPRRVAAITVAQRVAEEMGTRIKDGPVGYCVRFDDTTSASTKLK
FMTDGMLVREALLSPSLDAYSVVVLDEAHERSLQTDILFGVIKRALAARKDLRVVVMSAT
LDVGLFESFFKESSPAVLRIPGRTHPVDIFYTTKALPDYLDAVLITTLQIHLDNAENNGS
ILVFLTGQEDIETMEGLLNDYGTRLPATSSKLLVCPIFSAMPREAQMLAFEPAPRDVRKV
ILATNIAETSITINGVRFVVDAGLVKQRSFVGHMEHLHVESISQAQAWQRSGRAGREAPG
VCYRLFPEDKFEELPARAIPEIKRVSLEIVVLQLKTMGIDDILGFDFIERPNTANLMRAL
EKLYALGAFHADGSLTPRGRTMASLPVDPMCAVMLLRALELECAADALSIVAMLSVESIF
YSPRDQRKKRRRPVLSLYRSMATSSCSSRSTTRTRKRRSSSVPSGAAIISSTTGPCSASR
KSATSLSRTSPRSRRRPRR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagaagcggcgtgagcgcgagtgggacgcccgcgaggccatggccaaggtc
cgggcgtcgctgcctatcttcgcgtggaagaagtcgatcctggacacggtccggtcgagc
cgcgttgtgatcgtcgtcggcgagacgggctcgggcaagacgacgcagatcccgcagtac
atcttcgaggcgcacatgacgaacccgagcaagaagatcgccgtgacgcagccgcgtcgc
gtcgccgccatcacagtcgcccagcgcgtcgccgaagagatgggcacgcgcatcaaggac
ggccccgtcggctactgcgtgcgctttgatgacacgacgtccgcgtccacgaagctcaag
tttatgaccgacggtatgcttgtgcgcgaggcgctgctctctccgtcgctcgacgcgtac
tcggtcgtcgtgctcgacgaggcccacgagcggtcgctgcagaccgacatcctctttggt
gtcatcaagcgcgcgctcgcggcgcgcaaggacctccgcgtcgtcgtcatgtcggcgaca
ctggacgtcggcctcttcgagtccttctttaaagagagctcgccagccgtgctgcggatt
cctggccgaacacacccggtggatattttttacacgaccaaggcgctgcccgactacctc
gacgcggtccttatcacaacgctgcagattcacttggacaacgccgagaacaatggcagc
attctcgtcttcctcacgggccaagaggacattgagaccatggaaggccttctcaacgac
tatggcacgcggctcccagcgacgtcctccaagctgctcgtgtgcccgatcttctcggcc
atgccccgcgaagcgcaaatgctggcgtttgagcctgcgccccgcgatgtgcgcaaggtc
attttggccaccaacattgccgaaacgtcgattacgatcaacggcgtccggttcgtcgtc
gacgctggccttgtcaagcagcggtcgtttgtcgggcacatggagcatttgcatgtcgag
tccatctcgcaggcgcaggcgtggcagcgcagtggtcgtgcgggtcgtgaggcccccggc
gtgtgctaccgcctcttccccgaggacaaattcgaggagctgccggcgcgtgcgatcccg
gaaatcaagcgcgtgagccttgagatcgtggtcttgcagctcaagaccatgggcatcgac
gacatcctcggctttgactttattgaacgtcccaacacggccaacctcatgcgggccctc
gaaaagctgtacgcactcggcgccttccacgccgatggctcactcacgccgcgcggtcgg
accatggccagtctcccggttgatcccatgtgtgcggtcatgcttctgcgcgccctcgag
ctcgagtgtgcggccgacgcgctgagtattgtggccatgctcagcgtcgagtcgatcttt
tactcgccgcgcgatcaaaggaaaaagcggcggcgtcccgtgctcagtttgtatcgctcg
atggcgaccagctcatgctcctctcggtctacaacgcgtacgcgcaaacgtcgctcaagc
agcgtgccaagtggtgccgcgatcatttcatcaaccaccggtccatgcagcgcgtcgaga
aagtccgcgaccagcttgtcacgtacctctccaaggtcgcgccgtcgtccgaggcgttga
DBGET
integrated database retrieval system
