Saprolegnia parasitica: SPRG_10003
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Entry
SPRG_10003 CDS
T04137
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_10003
Enzymes [BR:
spar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SPRG_10003
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPRG_10003
Prokaryotic type
SPRG_10003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_15
Motif
Other DBs
NCBI-GeneID:
24132139
NCBI-ProteinID:
XP_012206146
UniProt:
A0A067C272
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MLQRYKLTVEYLGSAYRGFQAQPEACGPTVQAELEKALALLMGSQDRLSRVVVSSRTDAG
VHAVANTAHVDLQRAVPHPPQVVRNAMNAFLRQRHQAIVVRDVEVVANDFHSRFEAIGRE
YIYQIHMPKAEFRHALPGRLPSALFTRDLSWHVERPLDTAAMAAACTHFLGEHDFTSFRG
AKCQAPSPIRTLTTLDLETLASHRADELNEDDATTLLHVKAAAPSFLYHMVRNIVGALVD
VGMHKLQPEDIPRILAAKDRSAAPAMAPAHGLYLRRVLCKPPPLTTHSTAPVVKDGE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcggtacaagctcacggtcgagtacctcggcagcgcgtaccgtggcttccaa
gcgcagcccgaagcctgcgggcccacagtacaggccgagctcgagaaggcgctggcgctg
ctcatggggtcacaagaccgcctctcccgcgtcgttgtctcgagccgcaccgacgccggc
gtccacgcggtggccaacacggcgcacgttgacctgcaacgcgccgtgccgcacccgccg
caggtcgtacgcaatgccatgaacgcgttcttgcgccagcgccaccaggcgattgtggtc
cgcgacgttgaagttgtagccaacgactttcactcgcgctttgaagcgatcggtcgcgag
tacatttaccagatccacatgcccaaggccgagttccggcatgcgctgccaggccgcctg
ccctccgcgctcttcacgcgcgacctctcatggcacgtcgagcggccgctggacactgcg
gccatggcggccgcctgtacccactttcttggcgagcacgactttacgagcttccgcggc
gccaagtgccaagcgccgtcgccgatccgaacgctcacgacgctcgaccttgagacgctc
gcttcacaccgcgcggacgagctcaacgaagacgatgcgaccacgctcttgcacgtcaag
gccgcggccccgtcctttctgtaccacatggtgcgcaacatcgtcggcgcgctcgtcgac
gtgggcatgcacaagctgcagccggaggacattccacgtatcttggccgccaaagaccgg
tcggccgcgccggcgatggcacccgcccacggcctgtacctgcggcgggtgctgtgcaag
ccgcctcctttgacgacgcacagcacagcaccggtggttaaggacggtgaatag
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