Saprolegnia parasitica: SPRG_10005
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Entry
SPRG_10005 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_10005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_10005
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_10005
Enzymes [BR:
spar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPRG_10005
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SPRG_10005
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SPRG_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
Nrap_D2
TUTase
AviRa
Motif
Other DBs
NCBI-GeneID:
24132141
NCBI-ProteinID:
XP_012206148
UniProt:
A0A067C8U6
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MGRKKAAAAAEVVKAKKQHFVEKAKKKEKLDKLRRQPKPAKRFHKVAATPEPLTVHEASD
MESEEDEALDDSTYISLRDSPVKASAATANETVTQAPWMRGRTKYTNKNIFLQLHEEILD
FVAFLSPTQDEIALRKEAIEDIRTVIADLWDGATIEAFGSHVTEMYLPTSDIDLIVHDAP
KGKQALWTLAQRLEDLGVVSFIEVIDSARIPIVKIVHAKTNVHMDFSFTTTSGLSTADLV
MMYMRKYPSFRPLVIVLKYFLLQRGLNETFKGGIGSFLLQLLVVSFLQQYARNHTKSADH
LNLGVLLVEFFELYGSSLNPSNVGLSVRNGGSYFMKEERDWRDAGRPFLLCVENPHDPSH
DVAANSFDIRKVFRTFAHAAKSLQAEICLRGKKHGTTGSILARAIAIDGFLQDRDGPSTF
GFDVVRNDPAEMAMLQKRYASRPE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaagaaggcggccgcggccgcggaggtggtcaaggccaagaagcagcacttc
gtcgagaaggccaagaagaaggagaagctcgacaagctgcgccgccagcccaagccggcg
aagcgcttccacaaggtcgcggcgacgcccgagccattgaccgtgcacgaagcctctgac
atggagagcgaggaagacgaggcccttgacgatagcacgtacatctcgctccgcgactcg
ccggtcaaggcgtcggcggcaacggcgaacgagactgtgacccaggcgccgtggatgcgc
gggcgcaccaagtacaccaacaagaacatctttctgcagctccacgaagagatcctcgac
tttgtcgcgttcttaagcccgacccaagacgaaattgcactgcgcaaggaggccatcgaa
gacattcgaaccgtcatcgccgacctctgggacggcgcgaccatcgaagcctttgggtcg
cacgtgaccgagatgtaccttcccacgagcgatatcgacttgatcgtgcacgatgcaccg
aagggcaagcaagcgttgtggacgctcgcgcagcgcctcgaggaccttggcgtcgtgagc
ttcatcgaggtcatcgactcggcgcgcatcccgatcgtcaagatcgtccacgccaagacg
aacgtgcacatggatttctcgttcacgacgacgtcagggctttcaaccgccgacctcgtc
atgatgtacatgcgcaagtacccgtcgttccggccgctcgtgattgtgctcaagtacttt
cttctgcagcgcggcctcaacgagacgttcaagggtggcattggctcgttcctgctccag
ctcctcgtcgtgagctttctccagcagtatgcgcgcaaccacacaaagagcgcggaccac
ctcaacctcggcgtgctccttgtcgagttctttgagctctacggctcgtcgctcaacccg
tccaacgttgggctcagcgtccgcaacggcgggtcgtactttatgaaggaagagcgcgac
tggcgcgacgccggccggccgttcttgctctgcgtcgagaacccgcacgacccgagccac
gacgtggccgccaactcgtttgacattcgcaaggtcttccgcacatttgcacacgcggcc
aagtcgctccaggccgagatctgcctccggggcaagaagcacggcaccaccggcagcatc
ctcgcgcgggcgattgcgatcgacgggtttctccaagaccgcgacggtccgtcgaccttt
ggctttgacgtggtccggaacgacccagccgagatggcgatgctccagaagcggtatgcg
agccggcccgagtaa
DBGET
integrated database retrieval system