Saprolegnia parasitica: SPRG_10255
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Entry
SPRG_10255 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03015
mRNA surveillance pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_10255
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_10255
03015 mRNA surveillance pathway
SPRG_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_10255
03041 Spliceosome [BR:
spar03041
]
SPRG_10255
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPRG_10255
TREX complex
SPRG_10255
Spliceosome [BR:
spar03041
]
Complex C
Other components
EJC/TREX
SPRG_10255
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPRG_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
24132374
NCBI-ProteinID:
XP_012204601
UniProt:
A0A067CDX3
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MSSLLNSLDMSLDDLIQKKKTTASSGNKGGRGGKESSGGAGPVRRGRANAGRGRSNGTPY
GRKSDDDVDMDDNSNHKNSNNNKSGRKASILSRLGGKAQGQDETGFKIFVSNLKFDVLED
DIKELFSTVGKVAKYEILYDRAGRSKGQARVWFTSIQSAQAAINKYDGCTLDNQPMKITM
DEGNARQGNNNSANKGDNGKNVRSGLFGTALKGATGKDVDFKVTFNGNGNGNRGGNGGRR
NGGGGARRGRGGRGEEKSAADLDDDMDTYMNKN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctcctcaactcgctcgacatgagccttgacgacctcatccagaagaagaag
acgaccgcgtcctcgggcaacaagggtggccgcgggggcaaggagtcctcgggcggcgcc
ggcccggtccgccgtggccgcgccaacgccggccgcggccgcagcaacgggacgccgtat
ggtcgcaagagcgacgatgacgttgacatggacgacaactcgaatcacaagaacagcaac
aacaacaagtcgggccgcaaggcgtcgatcctttcgcgccttggcggcaaggcgcagggc
caggacgagacgggcttcaagatctttgtctccaacctgaaattcgacgtcttggaagac
gacatcaaggagctctttagcaccgtcggcaaggtcgccaagtacgagatcctctacgac
cgcgctggccgctccaagggccaagctcgtgtttggttcacgagcatccagtcggcgcag
gccgccatcaacaaatacgatggctgcaccttggacaaccagcccatgaagatcaccatg
gacgagggcaacgcgcgccaaggcaacaacaacagcgccaacaagggcgacaacggcaag
aacgttcgctcgggtctgttcggcacggcgctcaagggcgccaccggcaaggacgttgac
ttcaaggtgacgttcaacggcaacggcaacggcaaccgtggtggcaacggtggccgtcgc
aacggcggcggtggtgcccgtcgtggccggggaggccgtggtgaggaaaagtcggccgcc
gacttggacgatgacatggacacgtacatgaacaagaactaa
DBGET
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