KEGG   Saprolegnia parasitica: SPRG_10939
Entry
SPRG_10939        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
spar  Saprolegnia parasitica
Pathway
spar03030  DNA replication
spar03420  Nucleotide excision repair
spar03430  Mismatch repair
spar03440  Homologous recombination
spar03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRG_10939
   03420 Nucleotide excision repair
    SPRG_10939
   03430 Mismatch repair
    SPRG_10939
   03440 Homologous recombination
    SPRG_10939
   03460 Fanconi anemia pathway
    SPRG_10939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:spar03000]
    SPRG_10939
   03032 DNA replication proteins [BR:spar03032]
    SPRG_10939
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_10939
Transcription factors [BR:spar03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    SPRG_10939
DNA replication proteins [BR:spar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    SPRG_10939
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     SPRG_10939
   MMR (mismatch excision repair)
     SPRG_10939
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     SPRG_10939
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon Cas12f1-like_TNB DUF223 DUF7479 DUF2039 RPA_interact_C
Other DBs
NCBI-GeneID: 24133022
NCBI-ProteinID: XP_012207159
UniProt: A0A067BZ50
LinkDB
Position
Unknown
AA seq 627 aa
MVALTPNAVQMLHSRQSPDGFQPWLQLIDIKKIPSASGKGGDRYRLVLSDGQYYMSGMLS
SQLSNATEDGTLSINCFVQLMDYVGNTVQGRKILILLGLGDVHPGYERIGAPESIEKAGS
APVPAPTYAAPTYAAPTYQAPSYQAPAPVQQPSYLPQAAPAHTPATTMTRNPYAAPAMNK
APVVREDPNMRISDIASLNPYSGGRWTIKARVTARAPVKNWTNARGQGKLCSFDLLDAKG
GEIRATLFNDAVDAFYDRLVPNGVFFFSGGKIKMANRKYSAINNDYEVTFDASSDIVPAG
EDHAIQAVQYNFKPITSIESVPPESTIDMIGIVKTVAPCAELTSKAGKQLQKRDITMVDD
TLAEIKVTLWSERAQDPTCDTWVDQVLAIKGCRVSEYNGRSIGTFSSTGFVLNPPLPESA
RLLNWYRGGGASTATKSLSVGGGGVSAGMGTFDQRSLVTDIKDRRLGYGQKPDYITLKGA
VSYIKHDANVSYQACPKCQKKVVQDAARNYNCEKCQSSLPTCENRYILSLVLQDSAGSTW
ASAFNDQGKIIMQGKTADELFELKDANVSLYESLFKAALFKTYLFRVRCKAEPHMDDLRV
KSQIVNLEPLNYVQESAELLDAIAKYT
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggtggccctcacgcccaacgcggtccagatgctccactcgcggcagagcccggatggc
ttccagccatggctccagctcatcgacatcaagaagatcccgtcggcctcgggcaagggc
ggcgaccgctaccgcctcgtcctctcggacggccaatactacatgagcgggatgctctcg
tcgcagctctcgaatgccacggaagatggcacgctgagcatcaactgctttgtccagctc
atggactacgtcggcaacaccgtccaaggccgcaagattttgattttgctcggcctgggc
gatgtgcatcctggctacgagcgcattggcgcccccgaaagcatcgaaaaggcgggctcg
gccccggtcccggcaccgacttatgctgcaccgacgtatgctgcgccgacgtaccaggcc
ccgtcgtaccaagcgccggccccggtgcagcagccgtcgtacttgccgcaggccgcgccg
gcccacaccccggcgacgacaatgacccgcaatccgtatgcggcgccggccatgaacaag
gcgccggtcgtgcgcgaggaccccaacatgcgcatctcggacattgcgtcgttgaacccg
tactcgggcggtcggtggacgatcaaggcgcgtgtcacggcgcgggcgcccgtcaagaac
tggacgaacgcgcgcggccagggcaagctctgcagctttgacctgctcgatgccaagggc
ggcgagattcgcgcgacgctcttcaacgacgcggtcgacgccttctacgaccggctcgtg
cccaacggcgtcttcttcttctcgggcggcaagatcaagatggccaaccgcaagtactcg
gccatcaacaacgactacgaagtgacgtttgacgcgtcctcggacattgtccctgccggc
gaagaccatgcgattcaggcggtgcagtacaacttcaagccgatcacatcgatcgagtcg
gtcccgcccgagtcgacgatcgatatgattggcatcgtcaagaccgtcgcgccgtgcgcc
gagctcacgtccaaggcaggcaagcagctgcagaagcgtgacattaccatggtcgacgac
acgctcgccgagatcaaggtgacgctctggagcgagcgcgcgcaggacccgacgtgcgac
acgtgggtcgaccaagtgctcgcgatcaagggctgccgcgtctccgagtacaacggccgc
tccattggcacctttagcagcacgggcttcgtgctcaacccgccgctgcccgagtcggcg
cggctcctcaactggtaccgcggcggcggcgcatcgaccgcgaccaagtcgctgagcgtc
ggtggcggcggcgtcagcgcgggcatgggcacctttgaccagcgctcgttggtgacggac
atcaaggaccgtcgccttgggtacggccaaaagcctgactacattacgctcaagggcgcc
gtgagctacatcaagcacgatgcgaacgtgagctaccaggcatgtcccaagtgccagaag
aaggtggtgcaggacgcagcgcgcaactacaactgcgaaaagtgccagtcgtcgctcccg
acgtgcgagaaccggtacatcttgtcgctggtgctccaagacagcgcggggagcacgtgg
gcgtcggcgttcaacgaccagggcaagatcatcatgcagggcaagacggccgacgagctc
tttgagctcaaggacgctaacgtgagcttgtacgaatcgctcttcaaggccgcgctcttc
aagacgtacctcttccgcgtgcgctgcaaggccgagccgcacatggacgacctccgcgtg
aaatcgcagattgtcaacctcgagccgctcaactatgtgcaagagtcggccgagctcctc
gacgcgatcgccaagtacacctaa

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