Saprolegnia parasitica: SPRG_10939
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Entry
SPRG_10939 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
spar
Saprolegnia parasitica
Pathway
spar03030
DNA replication
spar03420
Nucleotide excision repair
spar03430
Mismatch repair
spar03440
Homologous recombination
spar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPRG_10939
03420 Nucleotide excision repair
SPRG_10939
03430 Mismatch repair
SPRG_10939
03440 Homologous recombination
SPRG_10939
03460 Fanconi anemia pathway
SPRG_10939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spar03000
]
SPRG_10939
03032 DNA replication proteins [BR:
spar03032
]
SPRG_10939
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_10939
Transcription factors [BR:
spar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SPRG_10939
DNA replication proteins [BR:
spar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SPRG_10939
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SPRG_10939
MMR (mismatch excision repair)
SPRG_10939
DSBR (double strand breaks repair)
HR (homologous recombination)
SPRG_10939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Cas12f1-like_TNB
DUF223
DUF7479
DUF2039
RPA_interact_C
Motif
Other DBs
NCBI-GeneID:
24133022
NCBI-ProteinID:
XP_012207159
UniProt:
A0A067BZ50
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MVALTPNAVQMLHSRQSPDGFQPWLQLIDIKKIPSASGKGGDRYRLVLSDGQYYMSGMLS
SQLSNATEDGTLSINCFVQLMDYVGNTVQGRKILILLGLGDVHPGYERIGAPESIEKAGS
APVPAPTYAAPTYAAPTYQAPSYQAPAPVQQPSYLPQAAPAHTPATTMTRNPYAAPAMNK
APVVREDPNMRISDIASLNPYSGGRWTIKARVTARAPVKNWTNARGQGKLCSFDLLDAKG
GEIRATLFNDAVDAFYDRLVPNGVFFFSGGKIKMANRKYSAINNDYEVTFDASSDIVPAG
EDHAIQAVQYNFKPITSIESVPPESTIDMIGIVKTVAPCAELTSKAGKQLQKRDITMVDD
TLAEIKVTLWSERAQDPTCDTWVDQVLAIKGCRVSEYNGRSIGTFSSTGFVLNPPLPESA
RLLNWYRGGGASTATKSLSVGGGGVSAGMGTFDQRSLVTDIKDRRLGYGQKPDYITLKGA
VSYIKHDANVSYQACPKCQKKVVQDAARNYNCEKCQSSLPTCENRYILSLVLQDSAGSTW
ASAFNDQGKIIMQGKTADELFELKDANVSLYESLFKAALFKTYLFRVRCKAEPHMDDLRV
KSQIVNLEPLNYVQESAELLDAIAKYT
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctcacgcccaacgcggtccagatgctccactcgcggcagagcccggatggc
ttccagccatggctccagctcatcgacatcaagaagatcccgtcggcctcgggcaagggc
ggcgaccgctaccgcctcgtcctctcggacggccaatactacatgagcgggatgctctcg
tcgcagctctcgaatgccacggaagatggcacgctgagcatcaactgctttgtccagctc
atggactacgtcggcaacaccgtccaaggccgcaagattttgattttgctcggcctgggc
gatgtgcatcctggctacgagcgcattggcgcccccgaaagcatcgaaaaggcgggctcg
gccccggtcccggcaccgacttatgctgcaccgacgtatgctgcgccgacgtaccaggcc
ccgtcgtaccaagcgccggccccggtgcagcagccgtcgtacttgccgcaggccgcgccg
gcccacaccccggcgacgacaatgacccgcaatccgtatgcggcgccggccatgaacaag
gcgccggtcgtgcgcgaggaccccaacatgcgcatctcggacattgcgtcgttgaacccg
tactcgggcggtcggtggacgatcaaggcgcgtgtcacggcgcgggcgcccgtcaagaac
tggacgaacgcgcgcggccagggcaagctctgcagctttgacctgctcgatgccaagggc
ggcgagattcgcgcgacgctcttcaacgacgcggtcgacgccttctacgaccggctcgtg
cccaacggcgtcttcttcttctcgggcggcaagatcaagatggccaaccgcaagtactcg
gccatcaacaacgactacgaagtgacgtttgacgcgtcctcggacattgtccctgccggc
gaagaccatgcgattcaggcggtgcagtacaacttcaagccgatcacatcgatcgagtcg
gtcccgcccgagtcgacgatcgatatgattggcatcgtcaagaccgtcgcgccgtgcgcc
gagctcacgtccaaggcaggcaagcagctgcagaagcgtgacattaccatggtcgacgac
acgctcgccgagatcaaggtgacgctctggagcgagcgcgcgcaggacccgacgtgcgac
acgtgggtcgaccaagtgctcgcgatcaagggctgccgcgtctccgagtacaacggccgc
tccattggcacctttagcagcacgggcttcgtgctcaacccgccgctgcccgagtcggcg
cggctcctcaactggtaccgcggcggcggcgcatcgaccgcgaccaagtcgctgagcgtc
ggtggcggcggcgtcagcgcgggcatgggcacctttgaccagcgctcgttggtgacggac
atcaaggaccgtcgccttgggtacggccaaaagcctgactacattacgctcaagggcgcc
gtgagctacatcaagcacgatgcgaacgtgagctaccaggcatgtcccaagtgccagaag
aaggtggtgcaggacgcagcgcgcaactacaactgcgaaaagtgccagtcgtcgctcccg
acgtgcgagaaccggtacatcttgtcgctggtgctccaagacagcgcggggagcacgtgg
gcgtcggcgttcaacgaccagggcaagatcatcatgcagggcaagacggccgacgagctc
tttgagctcaaggacgctaacgtgagcttgtacgaatcgctcttcaaggccgcgctcttc
aagacgtacctcttccgcgtgcgctgcaaggccgagccgcacatggacgacctccgcgtg
aaatcgcagattgtcaacctcgagccgctcaactatgtgcaagagtcggccgagctcctc
gacgcgatcgccaagtacacctaa
DBGET
integrated database retrieval system