Saprolegnia parasitica: SPRG_11288
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Entry
SPRG_11288 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_11288
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPRG_11288
Spliceosome [BR:
spar03041
]
Complex C
Other components
Complex C specific factors
SPRG_11288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
UvrD-helicase
PhoH
INT_SG_DDX_CT_C
TsaE
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
24133336
NCBI-ProteinID:
XP_012205489
UniProt:
A0A067CAK9
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MQRSASGRPSMMVPGRNYAQLSDRGEDLPIPVLAPPTTALPIAARKREILYAVETSSVVI
LAGETGSGKTTQTPQYLHRARFGRIVVTQPRRIAAITIAERVAQEMGVRLGGEVGYAVRF
EEKWDEDRTMIKFCTDGMLVRETMSDPLLSRYDVIMLDEAHERNLETDILLGLIKKVLRK
RPELRVIVASATLNIDAFVRYFTCKKREAETKLRSAVAISVEGRQYPVDVHYLDKPTGNY
LQKAIDTILEIHSTEPPGDILVFLPGQEEIEYVVERLSQSTPPTLLPMAFYGSLPVHVQQ
AVFEPTRPHERKAIIATTIAETSVTIPGVVYVIDSCFVKLPFFNPLTGVEALVTTVESKA
AAKQRMGRAGRVRPGKCYRLVTQDHYKTAFPKYTIPQIQRVNLAPIVLHLLSMGIHDIVH
FDFISPPSAEALVRALEVLYSLGAIGNDCRLIEPLGSHMAEFPVDPFLSRMLLASFDFKC
TEEALSVASMLSVEDVFLNPRGSKERKAKVAECIAEFAHAQGDHWTYLKIYTEFIENDMT
RQWCDEHCLNYRILVRAMEIRKQLLRYVKRFGSDEKRILSCGANPEPLLQCVVAGYFANA
AKLHGSATYRTIKDGRIVHVHPTSVHNSFLKSPEWIIYHQSVLTTQEYIREISAINPRWL
LAAAPDFYHCRDVSAVVSGSSGDVGLPKAKPPAPAPPATDANGRILFRRPTETTKKKLPV
HIGKSKGGLRSQF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggagcgctagcggtcgtccaagcatgatggtcccgggccgcaactacgcccag
ctctcggaccgtggcgaggacctgccaatcccagtgctagcgcctccgacgaccgctctc
ccgatcgcggcccggaagcgcgagatcctctacgcggtcgagacgtcctcggtcgtgatc
ctcgcgggcgagacaggcagcggcaagacgacgcagacgccgcagtacctccaccgcgcc
cgctttggccgcatcgtggtgacgcagccgcggcgcattgcggccatcacgattgcggag
cgcgttgcgcaggagatgggcgtccggctcggtggcgaggtcgggtacgcggtccgcttt
gaggaaaagtgggacgaagatcggaccatgatcaagttttgcacggacgggatgctcgtg
cgggagaccatgtccgacccgcttctctcgcgctacgacgtcatcatgctcgacgaggcc
cacgagcgcaacctcgagacggacattttgctcgggctcatcaagaaggtgctgcggaag
cgccccgagctgcgcgtgattgtcgcctccgccacgctcaacattgacgcgtttgtgcgc
tattttacatgcaagaagcgcgaagccgaaaccaagttgcgcagcgccgtcgccatctcg
gtcgaggggcgtcagtaccccgtcgacgtccactacttggacaagccgacgggcaactac
ctccagaaagccatcgacaccatcctcgagatccacagcaccgagccaccgggagatatc
ttggtcttcttgcccgggcaagaagaaatcgagtacgtcgtcgagcgcttgagccagtcg
acaccaccgacgctgctgcccatggcgttttacgggtccctgcccgtccacgtgcagcaa
gctgtgtttgaaccgacccggccccacgagcgcaaggccatcattgcaacgacgatcgcc
gagacgtccgtgacaattcctggcgttgtctacgtgatcgattcgtgcttcgtgaagctg
cctttcttcaacccgctcacgggtgtcgaagcgctcgtgacgactgtcgagtccaaggcg
gcggccaagcagcgcatgggccgcgccggccgcgttcgcccgggcaagtgctaccgcctc
gtgacgcaggaccactacaagacggcgtttcccaagtacacgattccgcagatccagcgc
gtcaacctcgcaccgatcgtgctccatttgctcagcatgggcatccacgatatcgtgcat
ttcgactttatctcgccgccgtcggccgaagcgctcgtgcgcgcactcgaagtcttgtac
tcgctgggcgcgatcgggaacgactgccgcctcatcgagccgctgggctcacacatggcc
gagtttcccgtcgacccgttcttgtcgcgcatgcttcttgcgtcctttgacttcaagtgc
acggaagaagcgctgagcgttgcgagcatgctttcggtggaagacgtcttcctcaacccc
cgaggctcgaaagagcgcaaggccaaggtggccgagtgcattgccgaattcgcccacgcc
caaggcgatcactggacgtacctcaagatttacaccgagtttattgaaaacgacatgacg
cggcagtggtgcgacgagcactgcctcaactatcgtatcctggtgcgcgccatggagatc
cgcaagcagctcttacgctatgtcaagcgatttggctcggacgagaagcgcatcttgagc
tgcggcgccaaccccgagccgctgctgcagtgcgttgtcgcaggctatttcgccaacgcg
gccaagctgcacggcagcgccacataccggacgatcaaggacggacgcattgtgcatgtc
cacccaacgtcggtgcacaactcgttcctcaagtcgcccgagtggatcatataccaccag
agcgttctcacgacgcaagagtacattcgcgaaatctcggcgatcaacccgcgctggctc
ttggcggcggcacctgacttttaccactgtcgcgacgtcagcgctgtcgtctcggggagc
tcgggggacgtcggtctcccaaaggccaagccaccggcgcccgcgccgcccgccacggat
gccaacggtcgcattctctttcggcgtccgacggaaaccacgaagaagaagctgcccgtg
cacattggcaagagcaagggcggtcttcgaagccagttctag
DBGET
integrated database retrieval system
