Saprolegnia parasitica: SPRG_11447
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Entry
SPRG_11447 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
spar
Saprolegnia parasitica
Pathway
spar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPRG_11447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_11447
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPRG_11447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
24133483
NCBI-ProteinID:
XP_012205838
UniProt:
A0A067C311
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MWVATGDCRLRLFDLATGQVLATHTRRDPIVWIAAVAPDLLAIALNTTVRSDQAIAAQLS
LWKKNKPKEDEDTGEAPKSKKKDWSAAWTVNLHGLEATHWKIELLDTAKGRFDCKIMSAQ
NRPFFGAAFQPSSDPEFIGCIAAVGGKELQFSRIYARPAGDNSPHNFRTRSLRHARRMTC
VALHPTRDEAVTGDVNGQIQVWRHLTEHMVPEPTKLHWHAHPVGSVTYSADGNYVASGGE
EFVFVLWHLESGKRHTIPRFPAAITSIVSRADGAGYYVATVDNSIVYYKHVADTRAWHVG
GLARVGLSSKKTLINGRLALEPWSQTLALQGTSLVGNVQLYEPLQDRVLRTVPLTERNQV
SATFNEVPTRTFATHIAFSHATRTMATIARTQDESVLRFWTRKTDGSFVVNTDVDQPHGI
GRVITAIAVHNTRIVTGDDQGEVRVWALGDGVWSCASMSQFRKVPVGAIAFSDDGSLLAI
AYGPLLTLWDPVTNALRSVLSYPKEAIVDIAFAGPSSPLLVARTSAGVYVWSLLTCSIVW
FYAVPFTCMSITKTANSSQLLLGVTTGKNAKVVGHLFVFDTASSIPTAIYRLPGVIINDA
VFYKQHLLVMDNHSTVHAVGDAMLVASLPATMEEESNSILQQMYGAWTVPNAASTSSLTK
EDATKAGNGGMFAAPSHVLPPLRSLYRSFLDTVLTKAKEHAAKSTSATHAPLKRTTTDEM
PAVSSKKAKVDDEAPEDTYAALKKVFSQK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcgcgacgggcgactgccgcttgcgcctctttgacctggccacgggccaggtc
ctcgcgacgcatacgcgcagggacccgatcgtgtggatcgcggccgttgcgcccgacctt
ttggcgatcgcactcaacacgacggtccggtccgatcaagcgatcgcagcgcaattgtcc
ctctggaagaagaacaagccgaaggaggacgaggacacgggtgaggcgcccaagtcgaag
aagaaggactggtcggcggcctggaccgtgaacctccacggcctcgaggcaacgcactgg
aagatcgaactccttgacacggccaagggccgctttgactgcaagatcatgtcggcgcag
aaccggccgtttttcggcgcggccttccagccgtcgtcggaccccgagtttatcgggtgc
atcgccgccgtgggtggcaaggagctccagtttagccgcatctacgcccggccggccggc
gacaacagcccgcacaattttcggacgcgcagcttgcgccatgctcgccgcatgacgtgt
gtcgcgctccacccgacgcgcgacgaggctgtgaccggcgatgtcaacggtcagatccag
gtgtggcgccacctcaccgagcacatggtgcccgagccgaccaagctccattggcacgcg
caccctgtcgggtcggtcacgtactcggccgacggcaactacgttgcgtctggcggcgaa
gagtttgtgtttgtgctctggcacctcgagagcggcaagcgccacacgatcccgcgcttc
cccgcggccatcacgtcgattgtctcgcgcgccgacggcgccggctactacgtggcgacc
gtcgacaactcgatcgtgtactacaagcacgtggccgacacgcgcgcatggcacgtcgga
ggcctcgcgcgcgtcggcctctcgagcaagaagacgctcatcaacggccgtcttgcgctc
gagccgtggtcgcagacgctcgcgctgcaaggcacgtcgcttgtcggcaacgtgcagctc
tacgagccgctccaagaccgcgtgctgcggacggtgccgctcacggagcgcaaccaagtg
tcggcgacgttcaacgaagtgccgacgcgtacgtttgcgacccacattgccttttcgcat
gcgacacgcacgatggcaacgatcgcgcgcacgcaggacgagtcggtgctgcgcttctgg
acccgcaagacggacgggtccttcgttgtcaacacggacgtcgaccagccgcacggcatc
ggacgcgtcatcacggccatcgcggtgcacaacacgcgcatcgtgacgggcgacgaccag
ggcgaagtgcgcgtgtgggcgctcggcgacggcgtctggtcctgcgcgagcatgtcgcag
ttccgcaaggtgccggtcggtgcgatcgccttctcggacgacgggtcgctgctcgcgatt
gcgtacggcccgctgctcacgctgtgggacccggtcacgaacgcgctccggtccgtgctc
tcgtacccgaaagaagcgattgttgacattgcctttgccggcccgtcgtcgccgctcctc
gtcgcgcggacctcggccggtgtctacgtctggtcgctcctcacgtgctcgatcgtgtgg
ttttacgcggtcccgttcacgtgcatgagcattacgaagacggcgaactcgagccagctc
cttctcggcgtcacgacgggcaagaatgccaaagtggttggccacctcttcgtgtttgac
acggcgtcgtcgatcccaaccgcgatctaccgcctccccggcgtcatcatcaacgacgcg
gtcttttacaagcagcacttgctcgtcatggacaaccactcgaccgtgcacgcggtcggg
gacgcgatgctcgtggcctcgctgccggcgacgatggaggaagagtccaactcgattctg
cagcaaatgtacggcgcgtggacggtcccgaatgcggcttcgacgtcgagtctgaccaag
gaggacgcgaccaaggccggcaacggcggcatgtttgcggcgccatcgcacgtgctgccg
ccgctccgatcgctctaccgttcgttcttggacacggtgctcaccaaggccaaggaacac
gcggccaagtcgacgagtgcgacccacgcgcccttgaagcgcacgacgacggacgagatg
ccggcggtgtcgagcaagaaggccaaggtcgacgacgaagcccccgaagacacgtacgcc
gcactgaagaaggtgttttcgcaaaagtaa
DBGET
integrated database retrieval system