KEGG   Saprolegnia parasitica: SPRG_11725
Entry
SPRG_11725        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K10754  replication factor C subunit 1
Organism
spar  Saprolegnia parasitica
Pathway
spar03030  DNA replication
spar03410  Base excision repair
spar03420  Nucleotide excision repair
spar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRG_11725
   03410 Base excision repair
    SPRG_11725
   03420 Nucleotide excision repair
    SPRG_11725
   03430 Mismatch repair
    SPRG_11725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spar03032]
    SPRG_11725
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_11725
DNA replication proteins [BR:spar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPRG_11725
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPRG_11725
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_lid_RFC1 AAA_30 nSTAND3 RuvB_N AAA_22 AAA_5 AAA_14 AAA_16 TIP49 AAA_19 NTPase_1 Mg_chelatase AAA_33 NACHT RsgA_GTPase NB-ARC NPHP3_N Sigma54_activ_2 AAA_24 AAA_25 AAA_17 Rad17 AAA_18 AAA_28
Other DBs
NCBI-GeneID: 24133746
NCBI-ProteinID: XP_012206789
UniProt: A0A067BW84
LinkDB
Position
Unknown
AA seq 780 aa
MDIRSFFAPKAGSAPKPDAAKSPGPTKASPKKAMPKKEPAPTRARKAKADAEPAPPAKSS
RKVIELDLDSDAEEVQPIKKAKVVEPITEKKDAPAKKEAKKAAPATKEMAKQAAAKEEAL
DLPKGRVRVPDGKPGCLEGLTFAFSGVLSSLPRDEAEMVVKRYGGSVASSVTRNVKYLVA
GELLESGDSVSVSSKFKDAVAKSIKILNQNDFFNLISERAERMTHKPKSMADIIGNGELA
KRLIQWLRDFDAVHVKGTKKVPYNPKMTENMGAKTVLLSGPPGIGKTTLAALAAAEVGMD
ILELNASDARSKKTLQSGLADIVGTQALSFGGSATKMGLKKRLIVMDEVDGMSSGDRGGM
AELIAIIKKSKAPIVCICNDRQSPKVRSLANHALDLKFRRPTKTQIATRLLAIGAAQGMR
IERNALEEAAERFGNDIRQLLNWMQMWNRSKTVMTYDDVMTHFYQSEKDEVLRLNPFSAT
QIIFKSGASFEARNEAYFVDYDLMPLMVQENYMQSIQSKRTSSDEKLDDITLAADMIAES
DLVSVYIRKEQRWDLLTKQAALNVGACTYAEGFVGRPEFSRWMGKNSSTNKAKRLLSELS
IRMRSHASGARNAIRMDYIPFMKEILLTRLLAGDESMDEVIDMLDACEISKDDLTESMEH
FKFPGVVRHSYAELDTKAKSAFTRKYNKGVHKSQALVEANLAANPAKKKTSKKVAADDDG
LGDDDGLMADDGDNDDDDDDVSQFQKKAPAKAAGKAPAKRKGKEPAGSAPKRARAPAKKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggacatccgcagcttcttcgcgccaaaggccggcagcgcgcccaagcccgacgcggcc
aagtcccccggcccgaccaaggcttcgcccaagaaggccatgcccaagaaggagcctgcg
ccgacgcgcgcgaggaaggccaaggccgacgccgagcccgccccgccggccaagtcgtcg
cgcaaggtcatcgagctcgacttggactcggacgccgaggaagtccagcccatcaagaag
gccaaggtcgtcgagcccattactgagaagaaggacgcgccggcgaagaaggaagcgaag
aaggccgcgccggcgacgaaggagatggccaagcaagccgcagccaaggaagaggcactg
gacttgccaaaaggtagagtacgcgtgcccgacggcaagcccggttgcttggaagggctc
acgtttgccttctcgggcgtgctctcgagtttgccgcgcgacgaggccgagatggtggtc
aagcgctacggcgggtcggtggcgtcgtccgtgacgcgcaacgtcaagtacctcgtcgcc
ggcgagctccttgagtcgggcgactcggtctccgtgagctccaagttcaaggacgcagtc
gccaagtcgatcaagattctcaaccaaaatgactttttcaacttgatctcggagcgcgcc
gagcgcatgacccacaagcccaagtcgatggccgacatcatcggcaacggcgagctcgcc
aagcgcctcatccaatggctccgggactttgacgcggtccatgtcaagggcacgaagaag
gtgccttacaaccccaagatgaccgagaacatgggcgcgaagactgtgcttctctcgggc
ccgcctggcattggcaagacgacgctcgccgccttggcggctgccgaagtcggcatggac
atcctcgagctcaacgcgagtgatgcgcgctccaagaagacgctgcagtcgggcctcgcc
gatatcgtggggacgcaggcgctctcgtttggcggctcggccaccaagatggggctcaag
aagcggctcatcgtgatggacgaggtcgacggcatgagctcgggcgaccggggcggcatg
gcggagctcattgcgatcatcaagaagagcaaggcgccgatcgtgtgcatctgcaacgac
cggcagtcgccaaaggtccggtcgctcgccaaccacgcgctcgaccttaaattccgtcgg
ccgacaaagacacagatcgcgacgcggctcctcgcgatcggcgcagcgcaaggcatgcgc
atcgaacgcaacgcgctggaagaagcggccgagcgctttggcaacgacattcgacaattg
ctcaattggatgcaaatgtggaaccggtccaagaccgtcatgacgtacgatgacgtcatg
acgcacttttaccagtcggaaaaggacgaggtgctgcggctcaacccgtttagcgccacg
caaatcatcttcaagagcggcgcgtcgttcgaggcccgcaacgaagcgtatttcgtcgac
tacgacctcatgccgctcatggtccaagaaaactacatgcaaagcatccagagcaagcgc
acgtcgtcggacgagaagctcgatgacattactctggcagccgatatgattgccgagagc
gacctcgtcagcgtctacattcgcaaggagcagcgctgggacctcttgaccaagcaagcc
gcgctcaacgtcggcgcgtgtacgtatgccgaaggctttgtgggccgccccgagttctcc
cgatggatgggcaagaactcgtcgaccaacaaggccaagcgactcctcagcgagctctcg
atccgcatgcgcagccatgcgtccggcgcccggaacgccattcggatggactacattccg
ttcatgaaggagattctcttgacgcgactcctcgccggcgacgagagcatggacgaggtc
atcgatatgctcgatgcgtgcgagatcagcaaggatgatttgaccgagtccatggagcac
ttcaagttcccgggcgtcgtgcggcactcgtacgccgagctcgatacaaaggccaagagt
gcgttcacgcgcaagtacaacaagggtgtgcacaagtcgcaggcgcttgtcgaagcgaac
ctcgcggccaacccggcaaagaagaagacgtccaaaaaggtcgcggcagacgacgacggt
ctcggcgacgacgacggtctcatggccgacgacggtgacaatgacgacgacgacgacgat
gtgtcgcagtttcaaaagaaagcgcccgccaaagccgcgggcaaggcgcctgcgaagcgc
aagggcaaggagcccgcagggtcggcgcccaagcgcgcgcgggcaccggccaagaagaag
taa

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