Saprolegnia parasitica: SPRG_11725
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Entry
SPRG_11725 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
spar
Saprolegnia parasitica
Pathway
spar03030
DNA replication
spar03410
Base excision repair
spar03420
Nucleotide excision repair
spar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPRG_11725
03410 Base excision repair
SPRG_11725
03420 Nucleotide excision repair
SPRG_11725
03430 Mismatch repair
SPRG_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spar03032
]
SPRG_11725
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_11725
DNA replication proteins [BR:
spar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPRG_11725
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPRG_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
AAA_30
nSTAND3
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_16
TIP49
AAA_19
NTPase_1
Mg_chelatase
AAA_33
NACHT
RsgA_GTPase
NB-ARC
NPHP3_N
Sigma54_activ_2
AAA_24
AAA_25
AAA_17
Rad17
AAA_18
AAA_28
Motif
Other DBs
NCBI-GeneID:
24133746
NCBI-ProteinID:
XP_012206789
UniProt:
A0A067BW84
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MDIRSFFAPKAGSAPKPDAAKSPGPTKASPKKAMPKKEPAPTRARKAKADAEPAPPAKSS
RKVIELDLDSDAEEVQPIKKAKVVEPITEKKDAPAKKEAKKAAPATKEMAKQAAAKEEAL
DLPKGRVRVPDGKPGCLEGLTFAFSGVLSSLPRDEAEMVVKRYGGSVASSVTRNVKYLVA
GELLESGDSVSVSSKFKDAVAKSIKILNQNDFFNLISERAERMTHKPKSMADIIGNGELA
KRLIQWLRDFDAVHVKGTKKVPYNPKMTENMGAKTVLLSGPPGIGKTTLAALAAAEVGMD
ILELNASDARSKKTLQSGLADIVGTQALSFGGSATKMGLKKRLIVMDEVDGMSSGDRGGM
AELIAIIKKSKAPIVCICNDRQSPKVRSLANHALDLKFRRPTKTQIATRLLAIGAAQGMR
IERNALEEAAERFGNDIRQLLNWMQMWNRSKTVMTYDDVMTHFYQSEKDEVLRLNPFSAT
QIIFKSGASFEARNEAYFVDYDLMPLMVQENYMQSIQSKRTSSDEKLDDITLAADMIAES
DLVSVYIRKEQRWDLLTKQAALNVGACTYAEGFVGRPEFSRWMGKNSSTNKAKRLLSELS
IRMRSHASGARNAIRMDYIPFMKEILLTRLLAGDESMDEVIDMLDACEISKDDLTESMEH
FKFPGVVRHSYAELDTKAKSAFTRKYNKGVHKSQALVEANLAANPAKKKTSKKVAADDDG
LGDDDGLMADDGDNDDDDDDVSQFQKKAPAKAAGKAPAKRKGKEPAGSAPKRARAPAKKK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggacatccgcagcttcttcgcgccaaaggccggcagcgcgcccaagcccgacgcggcc
aagtcccccggcccgaccaaggcttcgcccaagaaggccatgcccaagaaggagcctgcg
ccgacgcgcgcgaggaaggccaaggccgacgccgagcccgccccgccggccaagtcgtcg
cgcaaggtcatcgagctcgacttggactcggacgccgaggaagtccagcccatcaagaag
gccaaggtcgtcgagcccattactgagaagaaggacgcgccggcgaagaaggaagcgaag
aaggccgcgccggcgacgaaggagatggccaagcaagccgcagccaaggaagaggcactg
gacttgccaaaaggtagagtacgcgtgcccgacggcaagcccggttgcttggaagggctc
acgtttgccttctcgggcgtgctctcgagtttgccgcgcgacgaggccgagatggtggtc
aagcgctacggcgggtcggtggcgtcgtccgtgacgcgcaacgtcaagtacctcgtcgcc
ggcgagctccttgagtcgggcgactcggtctccgtgagctccaagttcaaggacgcagtc
gccaagtcgatcaagattctcaaccaaaatgactttttcaacttgatctcggagcgcgcc
gagcgcatgacccacaagcccaagtcgatggccgacatcatcggcaacggcgagctcgcc
aagcgcctcatccaatggctccgggactttgacgcggtccatgtcaagggcacgaagaag
gtgccttacaaccccaagatgaccgagaacatgggcgcgaagactgtgcttctctcgggc
ccgcctggcattggcaagacgacgctcgccgccttggcggctgccgaagtcggcatggac
atcctcgagctcaacgcgagtgatgcgcgctccaagaagacgctgcagtcgggcctcgcc
gatatcgtggggacgcaggcgctctcgtttggcggctcggccaccaagatggggctcaag
aagcggctcatcgtgatggacgaggtcgacggcatgagctcgggcgaccggggcggcatg
gcggagctcattgcgatcatcaagaagagcaaggcgccgatcgtgtgcatctgcaacgac
cggcagtcgccaaaggtccggtcgctcgccaaccacgcgctcgaccttaaattccgtcgg
ccgacaaagacacagatcgcgacgcggctcctcgcgatcggcgcagcgcaaggcatgcgc
atcgaacgcaacgcgctggaagaagcggccgagcgctttggcaacgacattcgacaattg
ctcaattggatgcaaatgtggaaccggtccaagaccgtcatgacgtacgatgacgtcatg
acgcacttttaccagtcggaaaaggacgaggtgctgcggctcaacccgtttagcgccacg
caaatcatcttcaagagcggcgcgtcgttcgaggcccgcaacgaagcgtatttcgtcgac
tacgacctcatgccgctcatggtccaagaaaactacatgcaaagcatccagagcaagcgc
acgtcgtcggacgagaagctcgatgacattactctggcagccgatatgattgccgagagc
gacctcgtcagcgtctacattcgcaaggagcagcgctgggacctcttgaccaagcaagcc
gcgctcaacgtcggcgcgtgtacgtatgccgaaggctttgtgggccgccccgagttctcc
cgatggatgggcaagaactcgtcgaccaacaaggccaagcgactcctcagcgagctctcg
atccgcatgcgcagccatgcgtccggcgcccggaacgccattcggatggactacattccg
ttcatgaaggagattctcttgacgcgactcctcgccggcgacgagagcatggacgaggtc
atcgatatgctcgatgcgtgcgagatcagcaaggatgatttgaccgagtccatggagcac
ttcaagttcccgggcgtcgtgcggcactcgtacgccgagctcgatacaaaggccaagagt
gcgttcacgcgcaagtacaacaagggtgtgcacaagtcgcaggcgcttgtcgaagcgaac
ctcgcggccaacccggcaaagaagaagacgtccaaaaaggtcgcggcagacgacgacggt
ctcggcgacgacgacggtctcatggccgacgacggtgacaatgacgacgacgacgacgat
gtgtcgcagtttcaaaagaaagcgcccgccaaagccgcgggcaaggcgcctgcgaagcgc
aagggcaaggagcccgcagggtcggcgcccaagcgcgcgcgggcaccggccaagaagaag
taa
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