Saprolegnia parasitica: SPRG_11737
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Entry
SPRG_11737 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_11737
Enzymes [BR:
spar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SPRG_11737
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPRG_11737
Prokaryotic type
SPRG_11737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
24133758
NCBI-ProteinID:
XP_012206801
UniProt:
A0A067C0B2
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MMLRIARGRPLLRLFSTEAKKRKVKVALVSGYLGTGYHGVQLQDTNGVPTVENEVRAALF
KAGCILESNLADLSKIGWSRSSRTDKGVHASCIVFSAKLLVDSDSINETDGRLRGLPEAI
NAHLPPSIRMFTATKVHQSFRAREDCTLREYEYFLPLSFLAPLATNGQSVEAMADTILAT
LPRYEGIFDFHNFTKQRGSFYKEKDRRVAKRMAKDAMSDDDEVLEEDDDDDDLSVPSNIS
IENGTRRSLQRHRRTIYRCRGSLIQDFHGSPYLRVHLTGASFLLNQIRCMVGAAIAVATG
HLSPMMFDAALETNQIVRVPTAPAEGLVLSSCALGGKRPLISLVHDHNTPSALEMKKFEA
PHRILLTSTESDALGAFCHNVIYKEVDRAWKTSEAVAKWPSTLALFHERFLEQQAHLPVL
QAAVDALRQNDTEKLAASMRVVQQARRDEDPIRCLPRAFSTSLCIRFGLTPGNYVTDLLI
AVKQSVLSGVVPVDATEDDLLAFVEDVGVDKLAARGQRIRLRQA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcggatcgcgcggggtcggccgctgctgcgcctcttctcgaccgaggccaag
aagcgcaaggtcaaggtcgcgctcgtgagcggctaccttggcacgggctaccatggcgtg
cagctgcaggataccaatggcgttccgaccgtcgagaacgaggtgcgtgctgcgctcttc
aaggccggctgcatcctcgaatccaacttggccgacctctccaagattggctggtcgcgc
agtagccgcacggacaagggcgtccacgcgagctgcattgtcttttccgccaagctgctc
gtcgacagcgatagcatcaacgagacggacggtcggctgcgtggcctgcccgaagccatc
aacgcgcacctgccgccgtcgatccgcatgtttactgccaccaaggtgcaccagtcgttc
cgcgctcgcgaagactgcacgctgcgcgagtacgagtactttctaccgctgtcgttcctc
gcaccgctcgcgaccaacgggcagtcggtcgaggcgatggcggacacgattctcgccaca
ctgccgcgctacgagggcatcttcgactttcacaactttaccaagcagcgcgggtcgttt
tacaaggagaaggaccgccgcgtcgccaagcggatggccaaagacgccatgagcgacgac
gacgaggtgctcgaggaggacgacgacgacgatgacctttccgtgcccagtaacatttcg
atcgagaatggcacgcggcggtcactgcaacgccatcgccgcacgatctaccgctgccgc
gggtcgcttattcaggactttcatggaagcccgtacctccgcgtgcacttgacgggcgcc
tcgttcctcctcaaccagatccgctgcatggtcggcgcggccatcgccgtcgcgaccggc
catctctcgcccatgatgtttgacgcagcgctcgaaaccaaccagattgtccgcgtgccg
actgcgccagccgaaggcttggtgctctcgagctgtgcgcttggcgggaagcggccgctc
atctcgctcgtccacgaccacaacacaccctcggcgctggaaatgaagaagtttgaagcg
ccgcaccggattctgctcacgtccaccgagtccgacgcgctgggcgccttttgccacaac
gtcatctacaaggaagtcgaccgcgcatggaagacgagcgaggcggtcgccaagtggccg
agcacgctcgcactcttccacgagcgattcctcgagcagcaggcacatctgcccgtgctt
caagccgccgtcgacgcgctgcgtcaaaacgacaccgagaagctggcggcgagcatgcgc
gtcgtgcagcaggcacgtcgcgacgaggacccgatccggtgccttccgcgtgccttctcg
acgtcgctttgcattcggtttggcctgacaccgggcaactatgtcacggacctcctcatt
gccgtcaagcagagcgttctgagcggcgtcgtgcctgtggacgccacggaagacgacttg
ctcgcgtttgtcgaggacgtcggcgtcgacaagctcgcagcccgcggccagcgcatccgc
ctgcgtcaagcatag
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