Saprolegnia parasitica: SPRG_11947
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Entry
SPRG_11947 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
spar
Saprolegnia parasitica
Pathway
spar03030
DNA replication
spar03410
Base excision repair
spar03420
Nucleotide excision repair
spar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPRG_11947
03410 Base excision repair
SPRG_11947
03420 Nucleotide excision repair
SPRG_11947
03430 Mismatch repair
SPRG_11947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spar03032
]
SPRG_11947
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_11947
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_11947
DNA replication proteins [BR:
spar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPRG_11947
DNA Replication Termination Factors
ELG1-RFC complex
SPRG_11947
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SPRG_11947
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPRG_11947
Check point factors
HRAD17(Rad24)-RFC complex
SPRG_11947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_16
AAA_assoc_2
RuvB_N
AAA_22
AAA_11
ResIII
Mg_chelatase
AAA_14
AAA_24
bpMoxR
AAA_2
nSTAND_NTPase5
AAA_5
AAA_28
AAA_3
SLFN-g3_helicase
DUF815
AAA_7
AAA_19
AAA_30
Gp44_lid
RNA_helicase
TIP49
MalM_C
Motif
Other DBs
NCBI-GeneID:
24133953
NCBI-ProteinID:
XP_012206214
UniProt:
A0A067BXV5
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MATKTTLPWVEKYRPKNVSDISHQDEVVNTLKSSIANGQLPHLLFYGPPGTGKTSTIIAV
ARELFGPKFRENGRFLELNASDDRGISVVREKVKAFAQGAISGSSSMPPFKIIVLDEADS
MTNDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRYQPLEVTSMTARIQYI
CGQEDVTCAQDAVDTLLEVSSGDLRKAINYLQSAKQLNGAEITKDDILAIAGVAPKELFD
KLWRHVESNSFDLMKNEVDDIIYSGFPVLTILHQLVDEILAHKSMSPGKKATVCLRVAEA
DKKLGDGASEHLQLLDVASFLMQTYHET
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagacgacgcttccgtgggtcgagaagtaccgcccgaagaacgtcagcgac
atctcgcaccaggacgaggtcgtcaacacgctcaagtcgtcgatcgcgaacggccagctg
ccccacctgctcttctacggcccgccgggcacgggcaagacgtcgacgatcattgcggtc
gcgcgtgagctctttggccccaagttccgcgagaatggccggttcctcgagctcaacgcg
tccgacgaccgcggtatcagcgtcgtgcgcgagaaggtcaaggcgttcgcccaaggcgca
atcagtgggtcgtcgtccatgccgccgttcaagatcattgtgctcgacgaagccgactcg
atgaccaacgacgcgcagtcggcgctgcgtcgcatgatggaaaactactccaaggtcacg
cgcttctgcctcatctgcaactacgtgagccggatcatcgagcctgtcgcgtcgcgctgc
gccaagtttcgctaccagccgcttgaagtgacctccatgacggcgcgcatccagtacatt
tgcgggcaagaggacgtgacgtgcgcgcaggacgcagtggacacgctcctcgaagtctcg
agcggggatttgcgcaaggcaatcaactacctccagagcgccaagcagctcaatggcgcc
gagatcacaaaagacgacatcttggccatcgcaggcgtggcccccaaggagctctttgac
aagctctggcgccacgtcgagtccaactcgtttgatctgatgaagaacgaagtcgacgac
attatttacagcgggtttcccgtgctcacgatcttgcaccagctcgtggacgagatcctt
gcgcacaagagcatgtccccgggcaagaaggcgacggtctgcctccgcgttgccgaagcc
gacaagaagctcggcgacggcgcgagcgagcacctccagctcctcgacgtcgcgtcgttc
ctgatgcaaacataccacgagacgtaa
DBGET
integrated database retrieval system