Saprolegnia parasitica: SPRG_12004
Help
Entry
SPRG_12004 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_12004
03015 mRNA surveillance pathway
SPRG_12004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_12004
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPRG_12004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
24134006
NCBI-ProteinID:
XP_012206424
UniProt:
A0A067C7S6
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRVRAPSFEDDDDTHGLSTQPTLAYGHAPSLPTLDPSRQPELLHIKAVPQNDDEQGGAL
FAKHITATCERSAYQRAHASSSYGALTTQLTLKPSDELNDPKELARLLGSCHMKTTADLV
RKDEMLRAKARADMAKASQARNMSFSSVEASVEEWKRKVQAEKEAKEKALAAERAAEAAR
QAKEDEAAAQAKAKAEEEAEAEANEEAAKAEADEKEAKASAEAKANEDDKTKAATEAAAA
RAKADAAQKASVPAAKEPHVLESEARLQRLRAVHAASEPILNSTDPRVKKIRMDVKKQIG
EACNQVANTPKSIKLVVTKLCKVLSEARAAGPEYLNFSLDILATRLTSQVKVLTEIRSCF
PLAHVAAMCSVHTPELADIFVAHLNQICPFTVPFCPPLRPEQSPQEFLATIGMEWDDERQ
AAEELEKYQMRMSMAIALLAATMQPPHTYTAMTILALLETAGFALLSQYKRQFQKLLELL
QRHVLPDLSRDAKSGAAANLARLNTFLGENQVRNEPEGRVPKESEISKDDEEHESSNDSR
GGYNNNNSNNRGNGGGRGRGRGRGYR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagttcgtgcgccaagcttcgaggacgacgacgatacgcacggtctctcgacg
cagccaacgcttgcctatgggcatgcgccttctctaccgacgctagacccatcgagacag
ccagagctcctgcacatcaaggcggtacctcaaaacgacgacgagcaaggcggcgcgctc
ttcgccaagcatatcacagccacatgtgagcgcagcgcgtaccagcgggcgcatgcaagc
agcagctacggcgcattgacgactcaactcacgctcaagccatcggacgagctcaacgac
ccaaaagagctcgcgcgcttgctcggttcgtgccacatgaagactacggccgacctagtg
cgcaaggacgagatgttgcgagcaaaggccagggcagacatggccaaggcatcgcaggcg
cgaaacatgtcgttctcaagcgtggaagccagtgtggaagagtggaagcgcaaggtccag
gcggagaaggaggcgaaagagaaggcgttggcggccgaacgcgctgccgaggcggcgcgc
caagccaaagaggacgaagcagctgcccaggccaaagccaaagcggaagaggaggcggag
gcggaagcgaacgaagaggcagccaaggcagaagccgacgaaaaggaggcaaaggccagc
gcggaggccaaggcaaacgaggacgacaagaccaaggcagcgaccgaagccgcggctgcc
cgagccaaggccgacgctgcgcaaaaagccagcgtcccagcggcaaaggagcctcatgtg
ctcgaaagcgaggcgcggctgcagcgcttgcgggctgtgcatgccgcgagtgagcccatt
ctcaactcgacagacccgcgcgtcaagaagatccgcatggacgtcaagaagcagattggt
gaagcgtgcaaccaagtggccaacacgcccaaatccatcaagcttgtggtcaccaagctc
tgcaaagtgctctcggaggctcgggctgcgggccccgagtacctcaacttttctctcgac
attctcgcgacgcgcctcacgtcccaagtcaaagtgctcactgaaatccggtcgtgcttc
ccgctcgcccatgttgcggccatgtgcagcgtgcacacgccagagcttgccgacatcttt
gtcgcgcacctcaaccagatttgcccgtttacggtgccgttctgcccgccgctccgtccg
gagcagagtccccaggagttcctcgcgacgattggcatggagtgggacgacgaacgccag
gcggctgaagaactggaaaagtaccagatgcgcatgtccatggcgatcgcgctcctggcc
gcgacgatgcagcccccgcacacgtacactgccatgaccatccttgcgctgctcgaaacg
gcaggtttcgcgctcctctcgcagtacaagcggcagtttcaaaagctattggagctcctc
cagcgccacgtgcttcccgatctctcgcgggatgccaagtcgggcgccgctgcgaacctc
gcgcgactcaacacgtttctgggcgaaaaccaagtgcgcaacgagccggagggccgcgtg
ccgaaggagtcggaaatctccaaggacgacgaagagcacgaaagctccaacgacagccgt
ggaggctacaacaacaacaacagcaacaatcgcggcaacggcggcgggcgcgggcgaggc
cgtggccgcggataccggtag
DBGET
integrated database retrieval system