Saprolegnia parasitica: SPRG_13996
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Entry
SPRG_13996 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spar04131
]
SPRG_13996
Membrane trafficking [BR:
spar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
SPRG_13996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
ACBP
PDZ_6
ANAPC4_WD40
PDZ
Motif
Other DBs
NCBI-GeneID:
24135831
NCBI-ProteinID:
XP_012208805
UniProt:
A0A067BQD4
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MWAARGPPRILRSAPGAVVCASADGVYKADVLLDAVHLRCYQIKDDYPAVYTLVRPANLP
IAAAFMAPRASRLAVLTETSLEMYLCANDIATGVTFNFALSITLGTKGVEVATTLAANEQ
HLFIGTSLGRMMVFQWADLRAGGHFVAPLDVLGSRPTLPVLTEPSAVRSISCSSATYVLT
SLVYVCVCFANGFAVLLSFAPTHLRLEEIVWLNEVISTLGDVTTCHVDGEASLIALGHHA
TLSLAVWGFTPDDLGAVTALAFTDDGRAIAVGFLLRGMAVFSIDSCKLMSTLPQQLVAKD
NELLRNGVSSLQWTNASSTLLVTPRLYDKNTPPPSSSTSAMDPSPCYTLVHVEMLKELDG
LCLSLAGEPLQCGAWVRSEAPFVPQPSDGLPGPAERSGHIIGGDLVVAINDQAVAHLAFN
DIVAILKELPLGSSVKLSLLRISFAKAFALATLALQSHAFCSTHKLALDEDQVVWEYALR
MQATLGDCVSPKPSMLAFEERAKFDGYMALAGLSSTLAMHRYLKLYLACFPRTNWQPIEA
LDHLLAFHNPETPRLPTATPTAVLVDFARSVLPMGKSDLHLLEATSIHVLAANCKNDPCG
VLSSVAIPVPSTYTNQNSPMQLLAVSSDDTRVAVAGTRGFALLHKPKGAWLCFGNVHDEQ
AFRVVAMDWWHNEALVVLVLQDDLLLIDVYARDRLDARCCRLVLPPTAFFYAIAVDHDRV
YCLSLQQVLVYRIATSGSADAGSLRFEIEFERAEALPRCNAMVGQAHLFVPIPRLVPHSN
AAYKKSGAWFTGWLGLLGESDKSMLLPRFALLDTLGCLYVWDPETKEQVLLASDISHVST
WRGPSELPTPCTLMHGLYGPKGFQAWWPLLDGVDFEPKAHADALRSFLQVHDPMRARSMG
KLHGSPDKMANTYYELLAEYGVQLEIANAEPESSDVVPISVHCIMVDPVLKFNPEVQLVG
IHARFGVLVGAFQDQYVGIYDIAARVQPLLHSLLSLLLVQKQSTLAQACLEVMAARLGLT
TPTKELVLVTALDNAFQRVWPRAVVERTLLLLQDPENEMETYCEIVANVARKVEPNRLPL
LFPIAGDPSALLQLCRQRHEVRTAANFLLCLDESVSTPTVLTRTRTNSFAQFQSRSALAL
ELIVDCVECDEDHLALQLVRVARAWEPGHYYHASNGASPQYERYIDEQLGKYAFQMLVQY
RFDKVVWLLSQTQVPLPVLFGDDLGVRSESLALIHERLDVLLTMDELRLLHSAVAAAKYE
QWATLLDALLHT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagctcgcgggccaccgcggatcttgcgctcggcgccgggcgcggtcgtctgc
gccagcgccgacggcgtctacaaggccgacgtcctcctggacgcggtgcatctgcgctgc
taccagatcaaggacgactacccggctgtgtacacgctcgtccgcccggcgaacctgccg
atcgccgccgccttcatggccccgcgggcgtcgcgcttggccgtactcaccgagacgagc
ctcgagatgtacttgtgcgccaatgacattgcaactggcgtcacgttcaactttgcgctc
agcattacgctcggcacgaaaggcgtcgaagtcgccacgacgctggccgcgaacgagcag
cacctcttcattggcacctcgctggggcgcatgatggtgtttcaatgggcggatctgcgc
gcgggtggccactttgtggcgcccctcgacgtgctcggcagccgccccacgttgcccgtc
ctcaccgagccatcggccgtgcgctcgatctcgtgcagcagcgccacgtacgtgcttacg
tcgctcgtgtatgtctgcgtgtgcttcgcgaacggctttgcggtgctcctgagctttgcg
ccgacgcacttgcgcctcgaagagatcgtgtggctcaacgaagtcatctcgacgcttggt
gacgtgaccacatgccacgtcgacggcgaagcgtccctcatcgccctcggccaccacgcg
acgctctcgcttgcagtgtggggctttacacccgacgacctcggtgcggtcactgccttg
gcctttaccgacgacgggcgcgcgattgcagtcggctttctgctccgcggcatggcggtc
ttctccatcgacagctgcaagctcatgtcgaccttgccgcagcagctggtcgccaaggac
aacgagctgctccggaacggcgtctcctcgctgcagtggacgaacgcgagcagcacgctt
ctcgtgacgccccgactgtacgacaagaacacgccgccgccgtcctcctcgacaagcgcg
atggacccgtcgccgtgctatacccttgtgcatgtcgagatgctaaaagagcttgacggt
ctctgcctctcgctggcgggcgagcctctgcagtgcggcgcgtgggtccgcagcgaggcc
ccgtttgtgccgcagccgtcggacggactgcccggtccagccgagcgcagcggccacatt
ataggcggcgacctagtggtcgcgatcaacgaccaagccgtggcgcacttggcgttcaac
gatattgtggcgatcctaaaagagctcccgttggggtcgtcggtgaagctctcgctgctg
cgcatctcgttcgcgaaagcatttgcgctcgcgacacttgcgctccagtcgcatgcgttt
tgttcgacgcacaagctcgcgctcgacgaagaccaggtcgtgtgggagtacgcgctacgc
atgcaggcgacgctcggcgactgcgtgtcgcccaagccgtcgatgctcgcgttcgaagag
cgcgccaagtttgacgggtacatggccctcgccggcctctcgagtactctggctatgcat
cggtacctgaaactctacctcgcatgctttccgcgcacaaactggcagccgatcgaggcg
ctcgaccacttgctggcctttcacaaccccgagacgccgcgtcttccgaccgcgacgccg
acggccgtgctggtcgactttgcacgctcggtgctgccgatggggaagagcgatttgcat
ctcctcgaagcgacgagcatccacgtgctcgcggccaactgcaagaacgatccgtgcggc
gtgctctcgtccgttgcgatccccgtgccgagcacgtacacgaaccaaaacagcccgatg
cagctcctcgccgtctcgtccgacgatacccgcgtcgccgtcgctggaacccgtggcttt
gccctcctccacaagcccaaaggcgcatggctctgtttcgggaacgtccacgacgagcaa
gctttccgcgtggtcgcgatggactggtggcacaacgaagcgctcgtcgtcctcgtgctc
caagacgatctgcttcttattgacgtctacgcccgcgaccgcctcgatgcccgctgctgc
cgcctcgtcttgccgccgaccgcgttcttttacgcgattgccgtcgaccacgatcgcgtc
tactgcctctcgctgcagcaagtgctcgtgtaccgtattgcgacgtccgggtcggccgac
gcggggagtctccgctttgagattgagtttgagcgggccgaggcgctgccgcgctgcaac
gccatggtcggccaagcccacttgtttgtgccgattccgcgcctcgtgccacactcgaat
gccgcatacaagaagagcggcgcgtggttcaccggctggctcggtctcttgggtgaatcg
gacaagtcgatgctcttgccacggtttgcgctcctcgatacgctcgggtgtctctatgtg
tgggaccccgaaacaaaggagcaggtgctcttggccagcgacatctcgcacgtctcgacc
tggcgtggcccgagcgagctcccgacaccgtgcacgctcatgcacggcttgtatggcccc
aagggctttcaggcgtggtggccgctcctggacggcgtcgactttgagccgaaagcgcac
gccgatgcgctccgatcgtttctacaagtccacgatccgatgcgcgcgcgcagcatgggc
aagctccacggatcgcccgataagatggccaacacatactatgagctcttggccgagtat
ggggtccaactcgagatcgccaacgccgagccagagtcgtcggacgttgttccgatctcg
gtgcactgcatcatggtcgatccagtcttgaaattcaacccggaagtgcagctcgtgggg
atccatgcccggttcggcgtcctcgttggcgcgtttcaagaccaatatgtcggcatctac
gacattgcggctcgtgtccagccgctcttgcactcgcttctctcgcttttgctggtgcag
aagcagtcgacgctcgcgcaggcgtgcttggaggtcatggcggcgcgcctcggtctcacg
acgcccacaaaagagctcgtgctcgtgaccgcactcgacaatgcgtttcaacgggtctgg
ccgcgtgcggtcgtcgagcgcacgctgcttttgctccaggaccccgagaacgagatggaa
acgtactgtgagatcgtggccaacgtcgcgcgcaaggtcgagcccaaccgcctcccgctc
ctctttccgatcgcgggcgacccgagcgcgctcctccagctctgccggcagcgccacgaa
gtgcggacggccgccaactttctcttgtgcctcgacgagtccgtgagcacgccgacagtc
ctgacgcggacgcgcaccaacagctttgcgcagttccagtcgcggagcgcgctcgctctc
gagctcattgtcgactgcgtcgagtgcgacgaagaccatttggcgctgcagctggtccgc
gtcgcgcgcgcgtgggagccgggccactactaccacgcgagcaacggcgcgtcgccgcag
tacgagcgctacattgacgagcagctcgggaaatatgccttccagatgcttgtccagtac
cgattcgacaaggtcgtatggctcctctcccagacccaagtgccactgcccgtcctgttt
ggcgacgatctcggcgtccgtagcgagagtctcgcgctcatccacgagcgcctcgacgtt
ctcttgacgatggacgagctgcgcttgctccacagcgctgttgcggcagccaagtacgag
cagtgggccacgcttctggatgcactcttgcacacgtag
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