KEGG   Saprolegnia parasitica: SPRG_14342
Entry
SPRG_14342        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
spar  Saprolegnia parasitica
Pathway
spar03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    SPRG_14342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_14342
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_14342
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     SPRG_14342
  RNA polymerase I system
     SPRG_14342
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     SPRG_14342
SSDB
Motif
Pfam: Spt4 PRAS_NT
Other DBs
NCBI-GeneID: 24136151
NCBI-ProteinID: XP_012208860
UniProt: A0A067BG27
LinkDB
Position
Unknown
AA seq 121 aa
MARDDYDDDSGLVHAEIPTTFRELRACMICSLVKTYSQFYESGCDNCAVLNMQDNRQRVT
DCTTAYFEGMIAMMQPRESWVAKWRRIGRFVPGIYAVSVTGELNDSIKKYLEDSNIPYRT
D
NT seq 366 nt   +upstreamnt  +downstreamnt
atggcccgtgacgactacgacgacgacagtgggctggtccatgcggagatcccgacgacg
tttcgcgagctgcgcgcgtgcatgatctgctccctcgtgaagacgtatagccagttctac
gagagcggctgcgacaactgcgccgtgctcaacatgcaggacaaccgccagcgcgtgacg
gactgcacgaccgcgtactttgaaggcatgattgcgatgatgcagccgcgcgagagctgg
gtcgccaagtggcgccgcatcggtcgcttcgtgccaggcatttacgccgtctcggtcacg
ggggagctcaacgatagcatcaaaaagtacctggaggattccaacattccttatcgcacg
gactaa

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