KEGG   Saprolegnia parasitica: SPRG_14839
Entry
SPRG_14839        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
spar  Saprolegnia parasitica
Pathway
spar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPRG_14839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_14839
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SPRG_14839
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 24136623
NCBI-ProteinID: XP_012209370
UniProt: A0A067C040
LinkDB
Position
Unknown
AA seq 317 aa
MEEEYDEEFGDDVLPTAAPAARPEATAIVVDEEEEEDDEPLYGTVTVTDAAAGGAEASTA
QDDGDDDEDDEEEDEGIAIVLKETEESPSKSSKLRFVRGGNQYVRDEHPLSTPPLQPRNP
GDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCA
KQLQKRRELAYQKTQEKEAEEKEKAAAALKAASAMSDPGFRMMGGPRGPMYPPRGPPPPW
HQPPPWHMRAPPTHPGTSSDDRKDGFKSGSSARNEKSSRSDSRVGRDRATVTATTTSVGT
MTSLAQQPSVEIAVAVP
NT seq 954 nt   +upstreamnt  +downstreamnt
atggaggaagagtacgacgaagagttcggcgacgacgtcctgcccacggctgcgccggcg
gctcgccccgaggcgacggccatcgtcgtcgatgaggaagaggaggaagacgacgagccg
ctgtatgggacagtgaccgtcacggacgccgctgctggcggcgccgaggcttctaccgcc
caagacgacggcgacgatgacgaagacgatgaggaagaggacgaaggtatcgcaatcgtg
ctcaaggagacggaagagtcgccgtccaagtcgagcaagctccgcttcgtgcgcggtggc
aaccagtacgtgcgcgacgagcacccgctgagcacaccgccgctgcagccgcgcaaccct
ggcgaccaatacgagccgacgttcgaggagctctcgctgctcggcatcggcggtcggcgc
acggcctttgacgtcgacattgaccagctcgaggagaagccgtggcgcaagccaggggtc
gatatctccgactacttcaactacggctttgacgaagcgtcgtggcgcgactactgcgcc
aagcaactgcagaagcggcgcgagctcgcgtaccaaaagacgcaagaaaaggaagccgaa
gagaaggagaaggcagcggcggcgctcaaggccgcgtcggcgatgtcggaccccggcttc
cgcatgatgggcggtccgcgcggccccatgtacccgccccggggcccgccgccgccgtgg
caccagccgccgccgtggcacatgcgtgccccgccgacacatcctggcacctcgtccgac
gaccgcaaagacggcttcaagtcgggctcctctgcccgcaacgaaaagtcatcccgcagc
gactcgcgggtcggtcgcgatcgcgcgaccgtgaccgctacgacgacaagcgtcgggacg
atgacaagcctcgcgcagcagccgtcggtcgagatcgcggtcgcggtcccgtga

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