Saprolegnia parasitica: SPRG_15383
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Entry
SPRG_15383 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_15383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_15383
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_15383
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPRG_15383
Spliceosome [BR:
spar03041
]
Complex A
U1 snRNP components
U1 related factors
SPRG_15383
Complex B
SPRG_15383
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPRG_15383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
24137117
NCBI-ProteinID:
XP_012211083
UniProt:
A0A067BJ79
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MAGKRKAADVSGNESDDSSFEVAPAADDSDVAASDDDGDDDDEEDDGFEVVASNAGPLDA
NARWQQQQHISIVGPSVEYKAPAAMRALDSTPFSAAAVAHLTSSGFGTPTPTQAQSWPIV
LDKQDLISIAKTGSGKTLAYLLPSFHALTAPKKHVQRTKKKYAFAVKPKDPRLVILVPTR
ELAMQIQSEAKKLLKPYPLRIVCIFGGASTKEQVEALDLHGVDVLVATPGRLRDFVSSGH
LGLDKVEIAVLDEADKMLELGFEDQIRHLMKLLPATRQTLLFSATWPVAMQTLAANYMRL
PVHVTIGSTSSPQLNRDIAQHFLICTSEADKMAKLKQALDIDASMKAIVFCRTKVECDKL
ATVYADPTVGCVHGDKLQSERTMTMNAFKKGTVMTLFATDVAARGLDVKDVGLVVNYDVP
ESIETFVHRVGRTGRAGERGVAVTLLTAYDITFARKVPAMLKAADMDVPKELIQLMRDVK
VAPIRDVQAKAKKPKVPQPQPRKAKAKNKKVSSKKRRTLCL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaagcgcaaggccgccgacgtgtccggcaacgagagcgacgacagcagcttc
gaggtcgccccggccgccgacgatagcgacgttgccgcctcggatgacgacggagacgac
gatgacgaggaggatgatggctttgaagtcgtcgcgtcgaacgccgggccgctggacgcg
aacgcccgctggcagcagcagcagcatatctcgatcgtgggcccgagcgtcgagtacaag
gcgccggccgccatgcgcgcgctagattcgactccgttctcggcggcggcggtggcgcat
ttgacgtcgagtgggtttggcacgccgacgccaacgcaagcgcagtcgtggcccatcgtg
ctcgacaagcaagacttgatttcgattgcaaagaccgggtcgggcaagacgcttgcgtac
cttctgccgtcgttccacgcgctcacggcgcccaagaagcacgtgcagcgcacgaagaag
aagtacgccttcgccgtcaagcccaaagacccgcgcctcgtgatcctcgtgccgacgcgc
gagctcgccatgcagatccaaagcgaggccaagaagctcctcaagccgtacccgctgcgc
atcgtgtgcatctttggtggcgcgtcgacaaaagagcaggtcgaggcgctcgacctccac
ggcgtcgacgtcctcgtggcgacgcccggtcgtctgcgagactttgtgagcagcgggcac
cttggcttggacaaggtcgaaatcgcggtgctcgacgaagccgacaagatgctcgagctt
gggtttgaagaccagatccgccacctcatgaagctcctcccggcgacacgccagacgctg
ctcttcagtgcgacgtggcctgtcgcgatgcagacgctggccgccaactacatgcgcctg
cccgtgcacgtgacgatcgggtccacgtcgtcgccgcagctgaaccgcgacattgcgcag
cactttctcatctgcacctccgaagccgacaagatggccaagctcaagcaagcattggac
attgacgcatcgatgaaggcgatcgtgttttgccgcacaaaagtcgaatgcgacaagctc
gcgaccgtgtacgccgacccaaccgttgggtgcgtgcacggcgacaagctccagagcgag
cgcacgatgaccatgaacgcgtttaagaagggcacggtcatgacgctctttgctacggac
gtcgcggcgcgcggtttggacgtcaaggacgtcggcctcgtcgtcaactatgacgtgccc
gaaagcatcgagacgttcgtgcaccgtgtcggccgcacggggcgcgcgggcgagcgcggt
gtagccgtgacgctactcaccgcgtatgacattacctttgcgcgcaaagtgcctgcgatg
ctcaaggccgccgacatggacgttccgaaggagctcatccagctcatgcgggacgtcaag
gtcgcgcccatccgcgacgtgcaggccaaggccaagaagcccaaggtgccgcagccgcag
ccgcgcaaggccaaggccaagaacaaaaaggtctcgtccaagaagcgccgtacgctctgc
ttataa
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