KEGG   Saprolegnia parasitica: SPRG_15430
Entry
SPRG_15430        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
spar  Saprolegnia parasitica
Pathway
spar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPRG_15430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_15430
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPRG_15430
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Utp21 WD40 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Cytochrom_D1 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 24137161
NCBI-ProteinID: XP_012209866
UniProt: A0A067BRL2
LinkDB
Position
Unknown
AA seq 988 aa
MTSVFTQSRVLQSFRALGVVASDVPVVLSRTGFITVATGKSFQVYDTEKLTPVAVSSPLP
KKIRALQTVLKHNRTFAAVGRNIHVFSRITETHVLSGHQAPILQLLAVGDVLFSIAEDNT
MRIWSTTDLELLETITFEAAFTPTFLLHPSTYLNKVLVGSTQGALQLWNVHTLKCVFAFK
GWGSEVTAMAQSPAVDVVAIGLADGRILLHNLKFDTTLMTFSQSKEGRVTSLSFRADDKA
PWLASGTTSGSVLLWNLETQRLESTILGAHEAPIASTVFFPNEPLLLTSAGDNALKIWIF
DELEARGRLLKSRSGHKAPPTKIRYYGNDVVQKTDGTVCQILSAGQDRAFRLFHTAREQQ
STELSQGPLHKKQRLHSSDERKLPPILQFAAMETREKDWSNVVTCHESEVPAYVWTLERK
AMGKKVLQQVEGHTTPGSIEHQRRLDSKATAVAISSCGNFALVGSVGGAIFKYNLQSGEK
RGSFPTAATPKAKLIRALTMPGASYKSAPDNSMADKHSGSVTGVVVDARNVLVISSSMDH
SLKFWDFYTHACIASMDLGSPITHLALHKDNNLIVAACDDFVLRVIDITTRKLVRRFHGH
THWITDVCFSPDARWLLSSSSDGSVRVWDLPTGKCIDFVKFKHAVTSVTMSPTGEFIATT
HVGQLGLFLWANRAYFETVFVDSEPSSPVLMGMPVPLSEVDVPLETQVVIAANEVHEVAA
EAPAYVSPLDATTSSFVRLSTAPKAMWQSLFQLELIKARNKPVEAPKAPEKAPFFLPTVR
KDDVHPTFEAVDAKKTKPQAKKPEEAKKPEEDVVMEGWGDGDDVAWGDDDDDDEVAAPTS
RIGKSTGLTTSRSKLASLLLQGAATAPQLGGKGQFALVVAYLQGLSASGVDVELSTLCMG
DFDVEGKGHLKLFLDCMLEMLEGRQEFQVVQVYLNRFLKVHEDILVTDADLLAHVAEVHA
IQQEGWEHLQRLLHNNLCLVQYFAKMQM
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgacgagtgtgttcacgcagagccgcgtcctccagagcttccgcgccttgggcgtcgtc
gcctccgacgtgccggtcgtgctctcgcgcacgggcttcatcaccgtcgcgaccggcaag
agcttccaggtctacgacacggagaagctgacgccggtcgcggtctcgtcgccgctgccc
aagaagatccgggcgctgcagaccgtcttgaagcacaaccggacgttcgccgcggtgggc
cgcaacatccacgtcttcagccgcatcaccgagacgcacgtgctctctgggcaccaggcg
ccgatcctgcagctgctcgcggtcggcgacgttctcttctcgatcgccgaagacaacacg
atgcgcatctggtcgaccacggacctcgagctgctcgagaccatcacgtttgaggccgcg
ttcacgcccacgttcctcttgcacccgtcgacgtacctcaacaaggtgcttgtcggctcg
acgcagggcgcgctgcagctctggaacgtccatacgctcaagtgcgtctttgccttcaag
ggctggggctcggaagtgacggccatggcgcagagtccggccgtcgacgtcgtcgcgatt
ggcctcgcagacggccgcatcctgctgcacaacctcaagttcgacacgacgctcatgaca
ttctcgcaaagcaaggaaggccgcgtcacgagcctctcgttccgcgccgacgacaaggcg
ccgtggctggcctcgggcacgacctcgggctcggtgctcctctggaacctcgagacgcag
cgcttggagtcgacgatcctcggcgcccacgaagcgccgatcgcgtcgaccgtcttcttc
cccaacgagccgctcttgctgacgtcggccggcgacaatgcgctcaagatttggattttc
gacgagctcgaggcgcggggccgccttctcaagtcgcgctccggccacaaggcgccgccg
accaagatccggtactacggcaacgacgtcgtccaaaagacggacggtaccgtgtgccag
atcctctcggcgggccaggaccgcgcgttccggctcttccacacggcgcgcgagcagcaa
agcaccgagctctcgcaaggcccgctgcacaagaagcagcgcctccacagctcggacgag
cgcaagttgccgccgattctgcagttcgcggccatggagacgcgcgagaaggactggagc
aacgtggtcacgtgccacgaatccgaggtgccagcgtatgtctggacgctcgagcgcaag
gccatgggcaagaaggtgctgcagcaggtcgagggccatacgacgccgggctcgatcgag
caccagcggcgcctcgactccaaggcgaccgccgtcgcgatcagttcgtgcggcaacttt
gcgctcgtcgggtcggtcggcggcgccatcttcaagtacaacttgcagtcgggcgagaag
cgcgggtcgttcccgacggccgcgacgcccaaggccaagctcatccgcgcgctgacgatg
cccggtgcgtcgtacaaatccgcgcccgacaactcgatggccgacaagcacagcgggtcg
gtcaccggcgtcgttgtcgatgcccggaacgtgcttgtgatctcgagcagcatggaccat
tcgctcaagttttgggacttttacacgcacgcgtgcatcgcgagcatggacctcgggtca
ccgatcacacacctcgcgctgcacaaggacaacaacttgatcgtggcggcgtgcgacgac
tttgtcttgcgcgtcatcgacatcacgacgcgcaagctcgtccgtcgtttccacggccac
acgcactggatcacggacgtatgcttctcgccggacgcgcgctggcttctctcgtcgtcc
tcggacggctcagtgcgcgtctgggacctcccgaccggcaagtgcatcgactttgtcaag
ttcaagcacgccgtcacgagcgtgaccatgtcgccgacgggcgagttcatcgcgacgacc
cacgtcggccagctcgggctcttcctctgggccaaccgcgcctactttgagaccgtcttt
gtcgactcggagccgtcgtcgcccgtcctcatgggcatgcccgtgccgctcagcgaggtc
gacgtgccgctggagacgcaggtcgtgattgccgccaacgaggtccatgaagtcgcagcg
gaggcgccggcgtacgtttcgccgttggatgccacaaccagctcgtttgtgcgcctctcg
acggcgcccaaggccatgtggcagtcgctcttccagctcgagctcatcaaggcccgcaac
aagcccgtggaagcgcccaaggcgcccgagaaggcaccgttcttcctcccgaccgtgcgc
aaggacgatgtgcacccgacgttcgaagccgtcgatgccaagaagaccaagccgcaagcc
aagaagccggaagaggccaagaagccggaagaggacgtggtcatggaaggctggggcgat
ggcgacgacgtggcgtggggcgatgacgacgacgacgacgaggtcgcggcgccgacgtct
cgcatcggcaagtcgacgggtctcacgacgtcgcgctccaagctcgcgtcgctcttgctg
cagggcgcggcgacggcgccgcagctcggcgggaagggtcagtttgcgctcgtggtcgcg
tacctgcagggtctctcggcgtcgggcgtggacgtggagctgagcacgctctgcatgggc
gactttgacgtcgagggcaagggccacctgaagctcttcctcgactgcatgctcgagatg
ctcgagggccggcaagagttccaggtcgtccaggtgtacctcaaccggttcctcaaggtc
cacgaagacattctggtgacggacgcggacctccttgcgcacgtggctgaggtgcacgcg
atccagcaggaagggtgggagcacctccagcgcctcctccacaacaacttgtgcttggta
cagtactttgccaagatgcaaatgtag

DBGET integrated database retrieval system