KEGG   Saprolegnia parasitica: SPRG_15570
Entry
SPRG_15570        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
spar  Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:spar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_15570
   03041 Spliceosome [BR:spar03041]
    SPRG_15570
   03036 Chromosome and associated proteins [BR:spar03036]
    SPRG_15570
Enzymes [BR:spar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPRG_15570
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     SPRG_15570
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     SPRG_15570
Spliceosome [BR:spar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    SPRG_15570
Chromosome and associated proteins [BR:spar03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    SPRG_15570
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Cas3-like_C_2 Utp25_C
Other DBs
NCBI-GeneID: 24137282
NCBI-ProteinID: XP_012210194
UniProt: A0A067BXQ3
LinkDB
Position
Unknown
AA seq 545 aa
MDGSQPRSRYVPPHLRGADDRSSNHGSERGSERGDDRRGGYGARGGRDNHREPPATNSRW
SSFESAPRDNYRGGGGRDGGYSRDGPREGGFSRGGGGGYGGPRKNRIGFYGDMNPNARLE
QELFGDCQSSGINFDSYDDIPVETSGEGVPPPVTTFNEAELGPEVCKNLELCRYDKPTPV
QKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLASMLRNGPANIDEETASGGRRRKIFPS
ALILAPTRELASQIYDEAKKFCYCTGVAPSSSMLRNLERGCDMMVATPGRLVDLIERGRV
SLAGIQFLILDEADRMLDMGFEPQIRRIVEQEDMSRERQTFMFSATFPREIQRLASDFLR
DYIFLTVGRVGAASKDVKQTVVYVDPQDKEDYLIRFLNQVQDGLILVFVETKRAADFLED
MLCHEGFPATSIHGDRSQREREEALASFRSGRTPVLVATDVAARGLDISGVTQVINYDLP
SNIDDYVHRIGRTGRVGNVGNALSMVNDKNRNIIRELHELLLENGQECPDWLGQMHQSSF
GRGGG
NT seq 1636 nt   +upstreamnt  +downstreamnt
atggacggaagccaacctcgtagcagatatgtccctccgcacctccgcggggccgacgac
cgcagcagcaaccatggcagcgagcgcggctccgagcgtggcgacgaccgccgtggcggc
tacggcgcccgtggcggccgcgacaaccaccgcgaacccccggccacgaactcgcgctgg
tcgtcgttcgagtcggcgccccgtgacaactaccgtggcggcggcggtcgcgacggcggc
tactcgcgtgacggtcctcgcgaaggtggcttctcgcgtggcggcggcggtggctacggc
ggcccgcgcaagaaccgcattggcttttatggcgacatgaacccgaacgcgcgcctcgaa
caagagctctttggcgactgccagtcgtcgggcatcaacttcgacagctacgatgacatc
ccagtcgagacgagcggtgaaggcgtcccgccgccggtcaccacattcaacgaagccgag
ctcggccccgaagtgtgcaagaacctcgagctctgccgctacgacaagccgacgcctgtc
cagaagtactcgatcccgatcggtctggctggccgcgacatgatggcctgtgctcagacg
ggttcgggtaagacgggtggcttcctcttcccgacgctcgcgtccatgctccgtaacggc
cccgccaacattgacgaggagaccgcgagcggtggtcgccgccgcaagatcttcccgtcg
gcgctcatcttggcgcccacgcgcgagctcgcgtcgcagatctacgacgaagccaagaag
ttctgctactgcacgggtgtcgccccgtcgtcgtctatgctccgcaacctcgagcgcggc
tgcgacatgatggtcgccacgcccggtcgtcttgtcgacttgattgagcgcggccgcgtg
tcgcttgccggcatccagttcctcattttggacgaagccgatcgcatgctcgacatgggt
ttcgagccgcagattcgccgcatcgtcgagcaggaagacatgtcgcgcgagcgccagacg
ttcatgttctcggccacgttcccgcgcgagatccagcgcttggcctcggactttttgcgc
gactacattttcttgacggtcggccgcgtcggcgctgcctccaaggacgtcaagcagacg
gtcgtgtacgttgacccgcaggacaaggaggactaccttatccgcttcctcaaccaagtc
caggacggcctcatcctcgtgttcgtcgagacgaagcgcgcggccgacttcctcgaagac
atgctctgccacgaaggcttcccggccacgtcgatccacggcgaccgctcgcagcgtgag
cgcgaagaggcgctcgcgtcgttccgctcgggccgcacgccggtgcttgtcgcgacggac
gtggccgcccgtggtctcgatatctctggcgtgacgcaggtcatcaactacgacttgccg
tccaacattgacgactacgtccaccgcatcggtcgtacgggccgtgtcggtaacgtcggt
aacgcgctctcgatggtcaacgacaagaaccgcaacatcatccgcgagctccacgaactc
ctcctcgagaacggccaggagtgccccgactggctcggccagatgcaccagagcagcttt
ggccgcggcggtggtc

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