KEGG   Saprolegnia parasitica: SPRG_15839
Entry
SPRG_15839        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
spar  Saprolegnia parasitica
Pathway
spar03018  RNA degradation
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_15839
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPRG_15839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_15839
   03041 Spliceosome [BR:spar03041]
    SPRG_15839
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPRG_15839
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SPRG_15839
Spliceosome [BR:spar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SPRG_15839
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 24137523
NCBI-ProteinID: XP_012210408
UniProt: A0A067BWA6
LinkDB
Position
Unknown
AA seq 91 aa
MASKRDPILDLAKFIDQSVRIKFAGGREVTGVLKGYDQLVNLVLDEAVEYFETPGETRNL
GLLVCRGTSVMLISPVDGTQELYSNPFLPEE
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcatcgaagcgcgacccgattctggacttggccaagttcatcgaccagagcgtgcgc
atcaagttcgccggcggccgcgaagtcacgggcgtcctcaagggctacgaccagctcgtg
aacctcgtgctcgacgaggccgtcgagtacttcgagacgcctggcgagacgcgcaacctc
ggtctcctcgtctgccgagggacatcggtcatgctcatctcgcccgtcgatggcacgcaa
gagctctattcgaacccgttcctgcccgaagagtag

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