Saprolegnia parasitica: SPRG_16008
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Entry
SPRG_16008 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_16008
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SPRG_16008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
24137676
NCBI-ProteinID:
XP_012210701
UniProt:
A0A067BK74
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MRNLIVLDERRAALPPGNWVAQSVDAAEDRVFAMTSDGCVACLVDNEVVWDCRLDSAADW
LWCHYNQELEAIVCASRSGAIVAIDAKERDVEVIGHFDAGLCAVAWNATDDQVALVTGES
LLITMSTSWDVLHEGLLDVPSLHAGSLVSLAWRADGQFLVVNAAAQIQVWEQANASWSLH
ALGRYEDGRPLTQLESTIAWAPNHTLVATSQILKQQLHVIFFERNGLRHGEFPVDAASVT
HLQWNTLSDVLALGVMTTAGQPMVQFWTRNNYHWYLKHERRLDDAIAALSWDLEAPYTVH
VLQQAGTLRTLTLEPLVHVSATDAATVAVIDGCELKRTFFQKAPIPPPMCASVLSLPAPI
NVIAFANDVAALVTSSGSWHLVLDDHVRPVMLQTAGFTQRMQSLAWDGASFWGVPEGDAT
TLCIVTLDLTTACVLHTSSLKAPGDETFGTLSMDGRAVQLSSGARFHPAQEELDETAHPL
YAHWALLEHDLCVGSAGHKLYVNGAVLHASVASFHISHGYLLATTLGAHPQLHFYLLDEL
VDCKHTPVHTQPVERGAKLVATVPSRADVILQMPRGNLEILSPRPLVLHLVAQCVASAAY
APALELCRKHRVDMNLLVDLDPPTFLASIEALLEAIPVRIRSDRLCLFLTNLHPVNVCGA
KYPLDAVHRMPESWDKVLEVCSAVRSALLVRDAAMYLLPLLTCEAKMQLFEPALLRLQAL
HATDKVLAEKGLKHLLFLVDVDVLYDHALGLYDMDLARLVAGRTQRDPQEYLPQLAAWEA
LQTTKSIAYMKYVIDVSLKRYAKALTHLTADTDAALALSLITSHHLYEDGLKLFSTTASP
IRRQILVAYGSHQVANGAFASAGHTFLSAVPPALELAVDAFRKASEWRLAMSIAARIDKC
DLPSLAYEMADELLNAMGTTRNPVAAAELYIHYCHDVDEGVATLVQAREWGLALQAAQLH
KRRDLIETEVEPLVLQAADDMETDIAGRFATYKKHWVRLTTLREQIRLFRLHGIDGKTND
GNGLDDGASSAASAFSNMSMSSVGSHNSNRDICFGTSLSFETSSHSATTSPFYAALSATE
PASSTNTKKMPRRFRRTKIQEGSADEDAYVETSLRAAMPNAEFLADLRQLLTMLVYFGHS
PRAQTLQVQLDAFFQHIQTHVPPAPVHGESTVVAWARPDDATWMVVSRLL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgatcgtgctcgacgagcgccgggccgcgctgccgccgggcaactgggtc
gcacagagcgtcgacgccgccgaagaccgcgtgtttgccatgacgagcgatggctgcgtg
gcctgtctcgtcgacaacgaggttgtctgggactgtcgcctcgacagcgccgccgactgg
ctatggtgccactacaaccaagagctcgaggccatcgtctgcgcctcgcgcagcggcgcc
atcgtggccattgacgcgaaagagcgcgacgtcgaggtcatcggccactttgacgctggc
ctttgcgccgtcgcgtggaacgccacggacgaccaggtcgcgctcgttacgggcgagagc
ctcttgatcacgatgagcacatcgtgggacgttttgcacgaaggcctcctcgatgtgcca
agcttgcatgcgggatcgctcgtgtctctggcgtggcgcgcggacggccagttcctcgtc
gtgaacgctgctgcgcagatccaggtctgggagcaggcgaatgcgtcctggtcgctgcat
gcattgggacgctacgaagacggtcggccgctcacgcagctcgagtcgacaattgcatgg
gccccaaaccacacgctcgtcgcaacgagccagatactcaagcagcaactgcacgtcatc
ttctttgaacgcaacgggctgcgtcacggcgaattccccgtcgacgcggccagcgtcacg
catctgcagtggaacacgctctcggacgtgcttgcgctcggcgttatgacaacggcgggt
cagccgatggtgcaattctggacccggaacaactaccactggtacctcaagcacgagcga
cgtctcgatgatgctatcgcggcgctcagctgggacctcgaggcgccgtacacagtacac
gtcctgcagcaggctggcacgctccgcacgctgacactcgagccgctcgtccacgtcagc
gcgacggatgcagcgaccgtcgccgtcattgatggatgcgagctcaagcgcacgttcttc
cagaaggcaccgatcccgccgcccatgtgcgccagcgtgctctcgttgccggcgccgatc
aacgttattgcgttcgccaacgacgttgccgcgctcgtcacgtcttcagggtcgtggcac
ctcgttctcgacgaccacgttcgccccgtcatgctccaaaccgccgggtttacccaaagg
atgcagtcgcttgcgtgggacggtgcgtcgttctggggcgtgccggaaggcgacgcgacg
accctgtgcatcgtgacgctcgatctgaccaccgcgtgtgttctccacacgtcgtcgctc
aaagcgccgggcgatgagacgtttggcaccctctcgatggacggtcgggccgtgcagctg
tcgtccggtgcacgtttccatccagcgcaagaagaattggacgagacggcccacccgctg
tatgcccactgggcgctgctcgagcacgatctctgcgtcgggtcggcgggccacaaactc
tacgtcaacggcgctgtgctgcacgcttctgtcgcgtccttccatatctcgcacgggtac
ctcctcgcgacgacgctcggcgcccacccgcagctgcacttttacctcctcgacgagttg
gtcgattgcaagcataccccggtgcacacgcagccggtcgagcgcggtgccaagctcgtg
gcgaccgtgccgtcgcgcgccgacgtcattctgcagatgccccggggcaacctcgagatc
ctctcgccgcgcccgctcgtgctccaccttgtcgcgcagtgcgtggcgtcggcggcgtat
gcgccggcgctggagctgtgtcgcaagcaccgtgtggacatgaacctgctcgtggatctg
gatccgccaacgtttcttgcgagcatcgaggcgcttctcgaggcgatcccggtgcgcatc
cggagcgaccggctctgtctcttcctcaccaatttgcatcctgtcaacgtctgcggcgcc
aaatacccgctggacgcggtccaccgcatgcccgagtcctgggacaaggtgctcgaggtg
tgctcggccgtgcgatcggcgcttctcgtgcgggacgccgcaatgtaccttctgccgcta
ctgacgtgcgaagccaagatgcagctcttcgaacccgccttgctgcgtctccaggccctg
catgcgacggacaaggtgctggcagagaagggcttgaagcatctgctcttcctcgttgac
gtcgacgtgctctacgaccacgcgctcgggctttatgatatggacttggcgcggcttgtc
gctgggcggacccagcgcgacccgcaagagtacctcccgcagttggccgcgtgggaagcg
ctgcaaacgaccaagtccatcgcgtatatgaagtacgtcattgacgtgagtttgaagcgg
tacgccaaagcgctcacccacctcacggccgacaccgacgccgcccttgcgctctcgctc
atcacatcccatcatctgtacgaggacggcctcaagctctttagcacgacggcgtctccg
attcggcggcaaattctcgtggcgtacgggtcgcatcaagtggcgaatggcgcgtttgca
agcgctggccacacgttcctctcggcggtgccgccggcgctcgagctggccgtggacgcg
ttccgaaaggcgtcggaatggcgtcttgcgatgagcatcgccgcgcgcatcgacaagtgc
gatcttccgtcgctcgcctacgagatggccgacgagctcttgaatgcgatggggacgacc
cgcaacccggtcgcggccgccgagctgtacatccactattgccacgacgttgacgaaggc
gtggccacgctcgtgcaggcgcgggagtggggcctggcgctgcaagctgcgcagctccac
aagcgacgggacctcatcgagaccgaagtcgagccgctcgtgctgcaagccgccgacgac
atggagacggacattgcaggacgattcgcaacgtacaagaagcactgggtgcggctcacg
acgttgcgcgagcagatccggctcttccgcctccacgggatcgacggcaagaccaacgac
ggcaacggcttggacgacggcgcgtcgagtgcggcgagtgccttctccaacatgagcatg
agctcggtcgggagccacaacagcaaccgcgacatttgcttcgggacgtcgctgagcttt
gagacatcgtcgcacagcgcgacgactagtcccttttacgcggccctgagcgcgaccgag
cccgcgagcagcacgaacacaaagaagatgccgcgccgcttccgccgcactaagatccaa
gaaggcagcgcggacgaagacgcgtacgtcgagacgagcctgcgcgccgcgatgccgaac
gccgagttcctcgcggatctgcgccagctgctcacgatgctcgtgtactttggccattcg
ccaagagcccaaaccctccaagtgcagctcgatgcgttcttccagcacattcagacccac
gtcccgcccgcgccagtccacggcgaaagcaccgtggttgcgtgggcccggccggacgac
gcgacgtggatggtggtgtcgcgactgctctga
DBGET
integrated database retrieval system