KEGG   Saprolegnia parasitica: SPRG_17059
Entry
SPRG_17059        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
spar  Saprolegnia parasitica
Pathway
spar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPRG_17059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_17059
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_17059
Enzymes [BR:spar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     SPRG_17059
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     SPRG_17059
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SPRG_17059
SSDB
Motif
Pfam: Ssu72 Baculo_E66
Other DBs
NCBI-GeneID: 24138623
NCBI-ProteinID: XP_012211741
UniProt: A0A067BH95
LinkDB
Position
Unknown
AA seq 132 aa
MTTPMFAMICANNVNRSTEAHDHLHAAGLRVCSFGAGNKVRFPGRSRYEPHIYEFFTPYE
VMYRELKAENEALFRHNGVLAMLERDILTKKAPQKWQDNSTTDLAQLDVVVCFEDRIFDI
VLEGSLPIAMLL
NT seq 399 nt   +upstreamnt  +downstreamnt
atgacgacgccgatgtttgcgatgatctgcgccaacaacgtcaaccgcagcacggaggcc
catgaccacctgcacgctgcgggcctgcgcgtgtgctccttcggcgccggcaacaaggtg
cgcttcccgggccgcagccgctacgagccgcacatctacgagttcttcacgccgtacgag
gtcatgtaccgcgagctcaaggccgagaacgaagcgctctttcgccacaatggcgtgctg
gccatgctcgaacgcgacattttgaccaagaaggcgccgcaaaagtggcaggacaactcg
acgaccgacctcgcgcagctcgacgtcgtcgtgtgctttgaagatcgcatctttgacatc
gtcctcgaaggtagtcttccgatcgccatgctgctctga

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