KEGG   Saprolegnia parasitica: SPRG_18548
Entry
SPRG_18548        CDS       T04137                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
spar  Saprolegnia parasitica
Pathway
spar03082  ATP-dependent chromatin remodeling
spar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SPRG_18548
   03083 Polycomb repressive complex
    SPRG_18548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spar03036]
    SPRG_18548
Enzymes [BR:spar01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     SPRG_18548
Chromosome and associated proteins [BR:spar03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     SPRG_18548
   HDAC complexes
    Sin3A-HDAC complex
     SPRG_18548
    BRAF-HDAC complex
     SPRG_18548
    REST complex
     SPRG_18548
    SHIP complex
     SPRG_18548
    MiDAC complex
     SPRG_18548
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     SPRG_18548
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SPRG_18548
  Chromatin remodeling factors
   NuRD complex
    SPRG_18548
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 24140071
NCBI-ProteinID: XP_012213383
UniProt: A0A067BC23
LinkDB
Position
Unknown
AA seq 336 aa
MGPLALADALGTPKKRVSYFYDSEIGNFSYGPGHCWKPHRVRITHNLIVNYGLAKHMHVF
RPPLVGVEDLTRFHSDDYIQFLRTVTPDNMHEHYRQLQRFAFNDGGDCPVFDGMFEFCQI
AATGSIGGAARLNDKSADIAINWGGGMHHAKRSEASGFCFVNDCNLGILELLKEHARVLY
IDIDVHHGDGVEEAFYTTNRVMTVSFHKYGGVFFPCTGNVKDIGYGEGKNYAVNVPCHDG
MDDESFIGVFRDVISKVMEHYAPGAIVLQCGADSLSGDRLGCFNLSVKGHGAAVAYVRSF
NIPTLIIGGGGYTLRNVPRCWCYETSVALGVEIPVT
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggggccgcttgcgctcgccgatgcgctgggcacgcccaagaagcgcgtctcgtacttc
tacgactcggagattggcaacttcagctacgggcccgggcactgctggaagccgcaccgc
gtgcgcatcacgcacaacctgattgtcaactacggcctcgccaagcacatgcatgtcttc
cggccgccgctggttggggttgaggacctcacgcgcttccactcggacgactacattcag
tttttgcgcacggtcacgcccgacaatatgcacgagcactaccgccagctgcagcggttc
gcgttcaacgacggcggcgactgccccgtctttgatggcatgtttgagttttgccagatc
gccgcgacgggctcgatcggcggcgccgcgcgcctcaacgacaagagcgccgacattgcc
atcaactggggcggcggcatgcaccacgcgaagcgctcggaggcctctggcttttgcttc
gtcaacgactgcaaccttgggatcctcgaacttctcaaggaacacgcacgggtgctgtac
attgacatcgacgtccaccacggcgacggcgtcgaagaggccttctacacgaccaaccgc
gtcatgaccgtctcgttccacaagtacggcggcgtcttcttcccgtgcacgggcaacgtc
aaggacattgggtacggcgagggcaagaactacgccgtgaacgtgccgtgtcatgatggc
atggacgacgagagcttcattggcgtcttccgcgacgtcatctccaaggtcatggagcac
tacgcgccgggggcgatcgtgctccagtgcggcgccgactcgctctcgggcgaccgcctc
ggctgcttcaacctcagtgtcaagggccacggcgctgcggtcgcctacgtcaggtcgttc
aacatcccgacgctgatcattggtggcggcggctacacgctccggaacgttccgcgctgc
tggtgctacgagacgtcggtggccctcggcgtcgagatcccggtaacttaa

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