KEGG   Saprolegnia parasitica: SPRG_18842
Entry
SPRG_18842        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
spar  Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:spar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_18842
   04121 Ubiquitin system [BR:spar04121]
    SPRG_18842
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    SPRG_18842
Ubiquitin system [BR:spar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SPRG_18842
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Sof1 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st PROPPIN Beta-prop_IFT140_1st Beta-prop_SCAP MIOS_WD40 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N SnAC
Other DBs
NCBI-GeneID: 24140338
NCBI-ProteinID: XP_012194058
UniProt: A0A067CYZ9
LinkDB
Position
Unknown
AA seq 446 aa
MKVKTISRVESQFTQELATDKTKIHRNYDPSLHPFERPREYTRALNATKLDKIFAKPFIA
ALDGHCDSVSCFASSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTTAPD
GNTFFSCSEDKTIKQWKLAIAIGDDEQPEALQTFHGKEPFMGIDHHWSNSTFATCSSVVQ
VWDHQRSDPLHEFSWGADSITSVKFNPAEPSLLASTGSDRAINLYDTRVATSMRKVVLEM
RSNALAWNPREPYHFTVANEDHNLYTFDMRNLDRALMVHKDHVSAVMDVSYSPTGREFVS
GSYDRTIRIFNVRSAKSREVYHTKRMQRIFAVKFSADSKFVLSGSDDTNIRIWKAEASKH
LGKLAPRERKQVEYKDALKKRFQHLTEVRRIAKHRHVPKAIKKASMAKQEANERDNKKLE
NRRKHSRPGKVPYVDTRKKTVIRNME
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaggtcaagaccatctcgcgcgtcgagagccaattcacgcaggagctcgcgacggac
aagaccaagatccaccgcaactatgacccgtcgctgcacccgttcgagcgtccgcgtgag
tacacgcgcgcgttgaacgccaccaagctcgacaaaatcttcgccaagccgttcattgcg
gcgctcgacggccactgcgacagcgtgagctgctttgcaagctcgcccaagagtctcgtg
gcctttgtcagtggcgcttgcgatggcgaaatccgcctctgggacttgccccggcgcaag
tgcgtctggtcggtctacggccacgcgggcttcgtgcgtggcctcacaacggcccccgac
ggcaacacgttcttctcgtgcagtgaagacaagaccatcaagcagtggaagctcgcgatc
gcgatcggcgacgacgagcagcccgaggcgctgcagaccttccacggcaaggagcccttc
atgggcatcgaccaccattggagcaacagcacattcgcgacatgcagctccgtcgtccag
gtatgggaccaccagcggtcggatccgctgcacgaattctcgtggggcgccgactcgatc
acgtctgtcaagttcaacccggccgagccgagtctgctggcgtcgacgggctcggaccgc
gccatcaacctctacgacacacgcgtggcgacctcgatgcgcaaggttgtgctcgagatg
cgctccaacgcgctcgcgtggaaccctcgcgaaccgtaccactttactgtcgccaacgag
gaccacaacttgtacacgtttgacatgcgcaacctggatcgcgcgctcatggtacacaag
gaccacgtgtcggctgtcatggacgtgtcgtactcgccgacgggccgcgagtttgtcagc
ggttcgtacgatcgcacgatccgcatcttcaacgtgcgctcggcaaagagtcgcgaggtg
taccacacgaagcgcatgcagcgcatctttgcggtcaagttcagcgccgactccaagttt
gtgctctcgggctcggacgacacgaacatccgcatctggaaggccgaagcgtccaagcac
ctcgggaagctcgcgccgcgtgagcgcaagcaagtcgagtacaaggatgcgctcaagaag
cgattccagcacctcactgaggtccggcgcatcgccaagcaccgccacgtgcccaaggcc
atcaagaaggcgtcgatggccaagcaggaagccaacgagcgcgacaacaagaagctcgaa
aaccgtcggaagcactcgcggcccggcaaggtgccgtacgttgacacgcgcaagaagacg
gtgatccgcaacatggagtag

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