Saprolegnia parasitica: SPRG_18886
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Entry
SPRG_18886 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14307
nucleoporin p58/p45
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_18886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_18886
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPRG_18886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
SlyX
UCH
IATP
Motif
Other DBs
NCBI-GeneID:
24140380
NCBI-ProteinID:
XP_012194100
UniProt:
A0A067D2N1
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MAFSFGASGASAAPASGGFSFGGASAAPASTGFSFGGSTPAATFGGSSTPTAAPAAPSST
GFSFGGSATPAAAPASTGFSFGGASATPAPASTGFSFGGNNASSTTPAPASTSFSFGGAS
STPAAAPASTGFSFGNTAATPSTSTFSFGSTPTAAPSLGFGAAPGNTKAISLDTRFEDLP
ADVQKQLIEFGTFVKEQSREEASIRAVSSAKLTQLKESTTHLEQAALVLQNIHARQSKNI
GALKTDVKDLVAQAESADQTHLHMTSETGIQRHEPMPSPYYWSLVQHFESRLATLKSQMT
DVHSQLQGAKHEDVSMDANEASTAHVTPRMLQETLQSQNEAFMRAAARVADVHERADTLR
DQYLSRQQAAPHGFGLARNPFEAADRVQAEEERRIVDRIRLSAAQSTLPASSSTAMTTAT
TAASTAAAPATSFSFGAATTPAPAAAPATGGFSFGAGAATPAAPSAFGTSAFGASTTGAV
PSLTKSVSFSGLGTPQVTPDAGAFGANKSARRPKTKKR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcgttcggagcgagtggagcgagcgcggcgccggcctcgggcggcttctct
tttgggggtgcctcggcagcccctgcatcgacgggcttcagcttcggcggcagcacgccc
gcagcgacctttggcggcagctcaacaccgacggctgcgcctgccgcgccttcatccacg
ggcttcagttttggcggcagcgcgacaccggcggccgcgccagcctcgacaggcttcagt
ttcggtggcgccagcgccacccccgcgccagcctcgacaggcttcagctttggcggcaac
aacgcaagctcgacgacacctgcacccgcctcgacgagctttagctttggtggcgcatca
tcaacgcccgctgccgcgccggcctcgacagggttcagctttggaaacacggccgctaca
ccatcgacgtcgacctttagctttggtagcacgccgaccgcagcgccgagcctcggattt
ggtgctgctccaggcaacacgaaggccatcagcctcgatacgcgctttgaggacctccca
gccgacgtgcagaagcagctcatcgagtttggtacgttcgtgaaagagcagagccgcgaa
gaggcgtcgatccgcgccgtctcttcggccaagctcacgcagctgaaggaaagtacgacg
caccttgagcaggcggcgcttgtgctccagaacatccatgcgcgccagtcgaagaacatt
ggcgcgctcaagacggacgtgaaggacctcgtggcgcaggccgagagcgctgaccagacc
cacttgcacatgacgagcgagacgggcatccagcgccatgagccaatgccgtcgccgtac
tactggtcgctcgttcagcactttgagagccgcctcgcgacgctcaagagccaaatgacg
gacgtgcacagccagctccaaggcgccaagcacgaagacgtgtccatggacgccaacgaa
gcgagcactgcacacgtgacgccccgcatgctccaggagacgttgcagagccaaaacgaa
gcgtttatgcgcgcggcggcccgggtcgcagacgtccacgagcgcgccgatacgctccgc
gaccagtatttatcccggcagcaggcggcgccccacggctttggcctcgcgcgcaacccg
tttgaagccgcggaccgtgtccaagccgaagaagagcgccggatcgtcgaccggattcgg
ctcagcgcggcgcagtcgacgctgcccgcgtcctcgtccacagctatgacgacggcgacg
acggcagcatcaaccgctgctgcgccggcgacgtcgttctcgtttggcgctgccacgacg
cccgccccggcggctgcacccgcgaccggtggcttttcgtttggtgctggtgcggccacg
cccgccgcccctagcgcctttggcacgagcgcgtttggggcttcgaccaccggcgccgtg
ccgtcgctcaccaaatcagtgagcttctcgggcctggggacgccgcaggtgacgccggac
gccggtgcatttggcgccaacaagtcggcccgtcgcccaaagaccaagaagcggtaa
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