Saprolegnia parasitica: SPRG_19062
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Entry
SPRG_19062 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
spar
Saprolegnia parasitica
Pathway
spar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPRG_19062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_19062
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SPRG_19062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
24140507
NCBI-ProteinID:
XP_012195258
UniProt:
A0A067CU74
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MTALGAPKEDDFEEEYTLRLIPSIKKYNVGRFNEPTLPNFSKCPQPVVMYEEPEKAPEED
EEKDKEPVGWNPALRKRRRRRRKDNRIKNWIIEDNESKTKFTGTVEGGVTSTYMLMVKTP
HKNEFQVVPVEQWFRFKKPLNYRTLTLEEAEEFNNEKKRAVERWLMNHNLAGEKKNDTEV
VPTSSIKTGALKSAGAAAAAKSDDIFTVAETKGGRRRPRKAAAEGDPTGDDGGDFDEVFD
DDESGHEIEGGNKGVAAESESSDDEMEDGSKDKKAAVSLDELLKRTQEQSKKDGAVENGD
KESDDDDDKESGGAQKYDYDDYGSLITNKPAEGTADAAAAPTETKPAAPAKPAPGKRALD
DKADESSNKKSKTSTQLKLTEAGVQEELIRFGGRMKTRDLIKRLKKFLITNEDKALLRDI
LRTICDKEEDPVDGVYMVLKTQFR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgctcggtgcgcccaaggaagatgactttgaggaagagtacacgctgcgcctg
atcccgtcgatcaagaagtacaacgtcggccgcttcaacgagccaacgctgcccaacttt
agcaagtgcccgcagcccgtggtcatgtacgaggagcccgagaaggcgccggaagaggac
gaagagaaggacaaggagcccgtgggctggaacccggcgctccggaagcgtcgccgtcgc
cgccggaaggacaaccgcattaaaaactggatcatcgaagacaacgaaagcaagaccaag
tttacgggcacggtcgagggcggtgtcacgtcgacgtacatgctcatggtcaagacgccg
cacaagaacgagttccaggtcgtgccggtcgagcagtggttccgcttcaagaagccgctc
aactaccgcacactgacgctcgaagaagccgaagagttcaacaacgagaagaagcgcgct
gttgagcgctggctcatgaaccacaacctcgctggtgagaagaagaacgatacggaggtc
gtgcccacgtcgagcatcaagacgggcgcgctcaagtcggcgggggccgcggctgccgcc
aagtcggacgatatctttaccgttgccgagaccaaaggcggacgccgccgaccgcgcaag
gcggcggccgaaggcgaccccaccggcgacgacggcggtgactttgacgaagtgtttgac
gacgacgagagcggccacgagatcgagggcggtaacaagggcgttgccgccgagtccgag
tcgagcgacgacgagatggaagacggcagtaaggacaagaaggccgccgtgtccctcgac
gagctcctcaagcgcacgcaggagcagagcaagaaggatggcgcggtcgagaacggcgac
aaggagtcggacgacgacgacgacaaggagtcgggtggcgcgcagaagtacgactacgac
gactatggcagcctcatcaccaacaagcccgcggaagggacggccgatgcggcggcggcg
ccgaccgaaaccaagccggcggccccggccaagcctgcaccggggaagcgtgcgctggac
gacaaggccgacgagtcgagcaacaagaagtccaagacgtcgacgcagctcaagctcacg
gaggcgggtgtccaggaagagctcattcgctttggcgggcgcatgaagacccgcgatttg
atcaagcgcctcaagaagtttttgattacaaacgaagacaaggcgctgctgcgtgatatt
ctgcggacgatctgcgacaaggaggaagacccggtcgacggtgtctacatggtgctcaag
acgcagttccgttag
DBGET
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