Saprolegnia parasitica: SPRG_19098
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Entry
SPRG_19098 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
spar
Saprolegnia parasitica
Pathway
spar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPRG_19098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_19098
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPRG_19098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
Suf
TPR_19
NRDE-2
DUF2594
Arb2
Motif
Other DBs
NCBI-GeneID:
24140542
NCBI-ProteinID:
XP_012195293
UniProt:
A0A067CUV9
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MADQVNYNMEKMIPELEDLQQLQIFSKDEIRQIVQKRRDFEYTMKRQPLRKVDCLRYIEY
ELNLDALRRQRKKRMGLKKTTISDHAPVARVHNIFERAVNKHKGDIDLWLQHIAYCKNNA
SRKMMSKLFTSALQLHPRNEAIWIEAASWEFNTNLNMDSARVLMQRSIRINPHSQRLWAE
YFRLEFLYVQKLRARRELLGLDAPVEKPKELSLDIETLDEEANLATDEAPALSAMEESRQ
AILNAAIPKIVYQNAIQAIPSDASFRLQFVEICHLFPTSYSKAVADIVLTSALEDFQTDA
TVWSAYCQQPAFDLERDVDAVRSEALERYATALETLPTDAMRHELLLWCAKELSRLPASA
WFLERTRALFTSVGPSSPALYAALVDFTLRTTDLTSAIAIATAATTAFPKDAHLWLLRAQ
LVMRAACVLEAAPATKRAKKSNATAPSKFQATVSVIEDGLRHVPGATLLWERYLQLQVAT
KASTSTIDATFKKALVATNNWTVLRQQYVTWLFRAKGMEAVRAVYRSFFHGQLLPNADTH
AWLEACVALEVAQPDSPAQRVAVKALFEKLLDLFGQTDEDVWVAYITYYRERGLQKEAHD
VHWRSTRAFPDSLMLATLRTLG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaagtgaactacaacatggagaagatgatcccggagctggaggatctccag
cagctccagatcttctccaaggacgagatccggcagatcgtgcagaagcgccgggacttt
gagtacacgatgaagcgccagccgctgcgcaaggtcgactgcctccgctacatcgagtac
gagctcaacctcgatgcgctccgccgtcagcgcaagaagcgcatgggcctcaagaagacg
acgatcagcgaccacgcgcccgtcgcgcgcgtccacaatatctttgagcgcgcggtcaac
aagcacaagggcgacatcgacctctggctgcagcacattgcgtactgcaagaacaatgcg
agccgcaagatgatgtccaagctctttacgagcgcgctgcagctgcacccgcgcaacgaa
gccatttggatcgaagccgcgtcgtgggagttcaacaccaacctcaacatggactcggcc
cgcgtgctcatgcagcgctcgatccgtatcaacccgcactcgcagcgcctttgggccgag
tactttcgcctcgaattcctctacgtccaaaagctccgcgcgcgccgcgagctcctcggc
ctcgacgcgccggtcgagaagcccaaggagctttcgctcgacattgagacgctcgacgaa
gaggccaaccttgcgacggacgaggcgccggcgctgagcgccatggaggagtcgcgccaa
gcgattctcaacgccgcgattcccaagatcgtctaccaaaacgcgatccaagcgatcccg
tcggacgcctcgttccgcctccagtttgtcgagatctgccacctcttccccacgagctac
tcgaaggccgttgcggatatcgtgctcacgtcggccctcgaagactttcagactgacgcg
accgtctggagtgcctactgccagcagcctgcgttcgatttggagcgtgacgtggacgct
gtgcgtagcgaagccctcgagcgctacgcgaccgcgctggagacgctcccgaccgacgcg
atgcgccatgaactgctcctctggtgcgccaaggagctctcgcgcctccctgcgtcggcg
tggttcttggagcggacgcgcgcgctcttcacgtccgtgggcccgtcatcgccggccctc
tacgccgcgctggtggactttacgctgcgcacgaccgacttgacgtcggcgatcgcgatc
gcgacggcggcgacgacggcctttcccaaggacgcgcacctttggctccttcgcgcccag
ctcgtcatgcgtgcggcgtgcgtgctcgaggcggcgccagcgaccaagcgcgccaagaag
tcgaacgcgaccgcgccgtccaagttccaggccaccgtgagcgtcattgaagacggcttg
cgccacgtccccggtgcgacgctgctctgggagcgctatcttcagctgcaggtggcgacc
aaggcgtcgacgtcgacgatcgacgccaccttcaagaaagcactggttgcgacaaacaac
tggaccgtgctgcgccagcagtacgtgacgtggctcttccgtgccaagggcatggaggcc
gtgcgcgcggtgtaccgcagcttcttccacggccagcttctcccgaacgccgacacgcac
gcgtggctcgaagcgtgcgtggcgctcgaggtcgcgcagcccgactcgccggcgcagcgc
gtcgcggtgaaggcgctctttgagaagctcctcgacttgttcggccagaccgacgaagac
gtgtgggtcgcgtacatcacatactaccgcgagcgcggcctgcaaaaggaggcccatgac
gtccattggcggtcgacgcgtgcgttccccgactcgctcatgctcgcgacgctgcgaacg
ctcggctag
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