Saprolegnia parasitica: SPRG_19227
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Entry
SPRG_19227 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_19227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_19227
Spliceosome [BR:
spar03041
]
Complex A
U1 snRNP components
U1 related factors
SPRG_19227
Complex B
SPRG_19227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
24140648
NCBI-ProteinID:
XP_012195647
UniProt:
A0A067CWG8
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MDEASGKPYYYHSGTKQCVWDEPEEYRIYKARVAVRLRFSDNVVTASPTNSEPMDMTPDE
TPIEEAPATATAIEATTTETATDAAVAVPTEPTEPTTATNKDDEEDDIAKYAAMSKADQV
AAFKAMLKTLPITPKMKWGDAQRLIADEPAWYALPTNGEKKQAYSEFLTQLTKELDLARR
RQQKVAREDFLKLLASCKKISVHTRWHEATTDDFGLIHDDRFKAVADDDERRELFLTFLD
DMARSEREYARKKRDEHKATILAYYASPELAISAESRWVVVRDVVFKDETIMGLGVAKRD
LEDFFFEYLDSLKKAAAEAQRLARIKARETEDALAAAFRAYLQDEIAAKRLTLEMRWRDC
LERFEANESFVALRNANTILARDVFEMTMDKWHATVRDERQWLHTLLERNGFRMQHKTTL
RDCLEQLQHTIEPLVGDDPRGQFYSRLLAEATVPESVLNWFHTTQRAEVERAERVAAAKK
QKLDAFTDLLTEFFFRSDHLDVPWDDARRLLEGRSRFRAMGSDAKAAFDAYMTTLRAKMQ
QVLKTRKLVDAEEGEVRASRSRDRKRRKRSRSSSSSSTSSRSPSSSSRKRHKKSSKKKSK
KHSKKTKKRSRSRSKRRSS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcgagcgggaagccgtactactaccactcgggcacgaagcagtgcgtctgg
gacgagcccgaggagtaccgcatctacaaggcgcgggtcgctgtccgactccgcttcagt
gacaacgtcgtgaccgcgtcgccgacgaacagcgagccgatggacatgacgcccgacgag
acgcctatcgaagaggcgccagcgacagcgaccgccatcgaagcgacaacgacggagacg
gccacggatgcagccgtcgcggtgcccaccgagcccaccgagccgacgacggcgacgaac
aaagacgacgaagaggacgatatcgccaagtacgccgccatgtccaaggccgaccaagtg
gctgcgttcaaggcgatgctcaagacgctgccgatcacgcccaagatgaagtggggcgac
gcgcagcggctcattgcggacgagcctgcgtggtatgcccttccgacaaatggcgagaag
aagcaagcgtactcggagtttctcacgcagctgaccaaggagctcgatcttgcccggcgt
cgccagcaaaaggtcgcgcgcgaggactttctcaaactgctcgcgtcctgcaagaagatc
tcggtgcacacacgctggcacgaagcgacgacggacgactttggtcttatccacgacgac
cgcttcaaggccgtcgccgacgacgacgagcgccgcgagctctttctgacctttctcgac
gacatggcccgcagcgagcgcgagtacgcccgtaagaagcgcgacgagcacaaggcgacg
atcctcgcctactacgcgtcgcccgagctcgccatctcggccgagtcgcgctgggtcgtg
gttcgcgacgtcgtcttcaaagacgagaccatcatggggctgggcgtcgcgaagcgggat
ctcgaagactttttcttcgagtacctcgactcgctcaagaaggcggcggccgaggcccag
cggctggcgcgcatcaaggcgcgggaaaccgaagatgcgctggcggcggcctttcgcgcc
tacctgcaggacgagattgcggccaagcgactcacgctcgagatgcgctggcgcgactgc
ctcgagcgcttcgaagccaacgagtcgtttgtggcgctgcgcaacgccaacacgatcctc
gcccgcgacgtctttgagatgaccatggacaagtggcacgcaacggtccgggacgagcgg
cagtggctgcacacgctgctcgagcgcaacggctttcgcatgcagcacaagacgactctg
cgcgactgcttggaacagctccagcacacgatcgagccgctcgtcggcgacgacccgcgc
ggccagttttactcgcggctcttggccgaagccaccgtgcccgagagcgtcctcaactgg
ttccacacgacgcaacgcgccgaagtcgaacgcgccgagcgggtcgcggcggcaaagaag
caaaagctggatgccttcaccgacctcctcacggaatttttcttccgatcggatcacttg
gacgtgccctgggacgacgcgcggcgtctcctcgagggccgcagccggttccgcgcgatg
ggctcggacgccaaagccgcctttgacgcctacatgacgacgctgcgtgccaagatgcag
caagtgctcaagacgcgcaaactcgtcgacgccgaagagggcgaggtgcgtgcgagccgg
tcgcgggaccgcaagcgacgcaaacggtcgcggtcgtcgtcgtcgtcgtcgacgtcgagt
cggagtccgtcgtcgtcgagtcggaagcggcacaagaagagctccaagaagaaatcgaaa
aagcactcgaagaagaccaagaagcgcagtcggtcgcgcagcaagcgccggtcgtcctag
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