Saprolegnia parasitica: SPRG_19723
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Entry
SPRG_19723 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_19723
03012 Translation factors [BR:
spar03012
]
SPRG_19723
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SPRG_19723
5.6.2.5 RNA 5'-3' helicase
SPRG_19723
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Other ribosome biogenesis factors
SPRG_19723
Translation factors [BR:
spar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SPRG_19723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
zf-AN1
ResIII
Helicase_RecD
DEAD
Viral_helicase1
AAA_22
PhoH
nSTAND3
SLFN-g3_helicase
AAA
UvrD-helicase
AAA_16
Flavi_DEAD
AAA_25
NPHP3_N
bpMoxR
ATPase_2
cobW
AAA_7
Rad17
SRP54
AAA_18
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
24141013
NCBI-ProteinID:
XP_012199542
UniProt:
A0A067CTI3
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MRPTMTLERWLDATRLMLQQERDAEIAQSKLENDTLPASLNPNVLLHLRLASATTGLFGR
TVLLLTQGQNRELPAHHFGIGDLVQLSVPTASLTPADANGFPRGIVTKVEEHAISLAFED
LDNSDEYHNQALRLDRLVNDATYRKLHEGIDRLAKYNDGPAMNILNVIFHGVEPQTNPIS
PLTPSRPMNASQIAAIEYALASKDIALIHGPPGTGKTTTVVELITQCVTKHKMKILVCAP
SNIAVDNVLEKVAATKPTFRVTRIGHPARLLPQVLQYCLDARIASADGTAIIADIRKEMG
ALQTKMAKARKQRAKSSGVYEMRRECQLLRKEIRDQVVREIVEHSDVLFATNAGAATKLL
ANLVFDVVIIDEAAQALEASCWIPLLMGKRCVLAGDHLQLPPTIKSDVAARAHMTLFDRI
TRMETTKGVVKMLSTQYRMHAAISDWSSHAMYDGKLASSDAVATRLLGDLAHVTHTTELT
APTLLLLDTAGCGLDEDQDEAPTHEALRVSKSNAGEATIVVAHVRALLSIGLRPDEIAVI
TPYNAQVQLLKRLLLPSLPRLEIRSQSKKTVGFLADDRRMNVAITRAKRHVALVCDTDTI
GKHPFLHALVEHFEAHGEYRSAEEYLSATRDETTANMFDSNALLSELQKDANEAKTPKAK
PTTKLAHVKKSALPTQGPPTPPTSVPSPPTSVPSPPTSVPTPSVPVATPPPAPINAPGHV
PVTEDDESEDEPPPTSTASAFGALVDDSSSDSEPDHLGDDEAKPAATNSLLRDLHKERVA
RQKALAVPSAASSAKKKKGKQKKAPASIPVAPIADKAPDEDDMAFLDRVATQATVCGVAS
CAQRITLMGSVCKFCHLKFCYSHGLPEVHGCGPAVRAFEQARHKTASSAVKSNSYQAKEK
RKLLQKALDEKLAAKSTDRKSTKATKAKAKP
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgaccatgaccctcgagcggtggctcgacgcgacgcgcctgatgctacagcaa
gagcgcgacgcggagatcgcgcagtccaagctcgagaacgatacgctgcccgcaagcctg
aacccgaacgtcctcctccatctgcgcttggcgtcggcgacaaccgggctctttggccgg
acagttctgctgctcacgcaaggccagaaccgcgagctgccggcgcaccactttggcatt
ggcgacctcgtgcagctaagcgttccgacggcgtcgctcacgcctgcggatgcgaacggc
ttcccgcgaggtatcgtcaccaaggtcgaggagcacgcgatttcgcttgcgttcgaggac
ctcgacaactcggatgagtaccacaaccaagcgcttcggctcgatcggctcgtgaacgac
gccacgtaccgcaagctgcacgagggcattgaccggctcgccaagtacaacgacggcccg
gccatgaacatcctcaacgtcatctttcacggcgtcgagccgcagaccaacccgatctcg
cccttgacgccgtcgcgcccgatgaacgcgtcacagatcgctgcgatcgagtatgcgctc
gcgtccaaggacattgcgctcatccacggaccgccgggcacgggcaagacgacgacggtc
gtcgagctcatcacgcagtgcgtgaccaagcacaagatgaagatcctcgtctgcgcgccg
tccaacatcgcggtcgacaacgtcctcgagaaggtcgcggcgaccaagcccacgtttcgc
gtcacgcgcatcggccacccagcacgactattgccgcaagtgctgcagtactgcctcgac
gcgcgcattgcctcggccgacggcacggccatcatcgccgacatccgcaaggaaatgggc
gcgctccagaccaagatggcgaaagcccgcaagcagcgcgccaagtcgtcgggcgtctac
gagatgcgcagagagtgccaactgctccgaaaggagatccgcgaccaagtcgtgcgtgag
atcgtcgaacacagtgacgtgctctttgctaccaatgcgggcgctgcgaccaagctcctc
gccaacctcgtgtttgatgtcgtcatcattgacgaagcggcgcaagccctcgaagcgagc
tgctggatcccgctgctcatgggcaaacgctgtgtgctcgcgggcgaccatttgcagctg
ccgccgaccatcaagtcggacgtggcggcgcgggcgcacatgacgctcttcgaccgcatc
acgcgcatggagacaaccaagggcgtcgtcaagatgctctcaacgcagtaccgcatgcac
gcagccatctccgactggtcgtctcatgccatgtacgacggcaagctcgccagcagcgac
gcggtggcgacgcgcttgcttggcgacctggcgcatgtgacgcacacgaccgagctcacc
gcgccgacgctgcttttgctcgacacggcgggctgcggcctcgacgaagaccaagacgag
gcgcccacgcacgaagcgctgcgcgtctcgaaatcgaacgcaggcgaagccaccatcgtc
gtcgcgcacgtccgtgcgctcttgagtatcggattgcgcccggatgagatcgcggtcatc
acgccatacaacgcacaggtgcagctactcaagcgtttgctcttgccgtcgcttccgcgt
ctcgagatccggtcccaatccaaaaaaacagtcgggttcttggccgacgaccgtcggatg
aacgtcgcgatcacgcgcgcgaagcgacacgtggcgctggtttgtgacacggacacgatc
ggaaagcacccgtttttacacgcactggtcgagcatttcgaagcgcacggcgagtaccgc
agcgcggaagagtacttgagcgcgacgcgggacgagacgactgccaacatgtttgattcg
aacgcgctgctctccgagctgcagaaagacgccaacgaggcgaaaacacccaaggcgaag
ccgacgacaaagctggcacacgtcaagaagagtgctctccccacacaaggaccgccgaca
cccccaacgtcggtgccaagccccccaacgtcggtgccaagccccccaacatcggtgccg
acgccgtccgtacccgtagcgacacctccaccagcgcccatcaacgccccggggcatgta
ccggtgactgaagacgacgagtcggaggacgagccgccgccaacatcgacagcgagcgcg
tttggagcactcgtcgatgactcgtccagcgacagcgagcccgatcatcttggcgacgac
gaggcaaagccagcggctacgaacagcctgctcagagacctccataaggaacgtgtggcg
cggcaaaaggcgctggcggtgccgagtgcagcatcgtctgccaagaagaagaaagggaaa
caaaagaaggctccagcgagcatcccagtggcgccgatcgcagacaaggcgccggacgaa
gacgacatggcgtttctcgatcgcgtcgcgacgcaagcgaccgtctgcggcgtagcctcg
tgcgcgcagcgcattacgctcatgggcagcgtgtgcaaattctgccacttgaaattttgc
tactcgcacggccttcccgaagtgcacggctgcggaccggccgtgcgcgcgttcgaacaa
gcgcggcataagacagcgtcgtcggccgtcaagagcaactcgtaccaagccaaagagaag
cgcaagctgctgcaaaaggccctcgacgagaagctggcggccaaatccaccgaccgcaag
tcgacaaaggcgaccaaggccaaggccaagccataa
DBGET
integrated database retrieval system