Saprolegnia parasitica: SPRG_19892
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Entry
SPRG_19892 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
spar
Saprolegnia parasitica
Pathway
spar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPRG_19892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spar03000
]
SPRG_19892
03021 Transcription machinery [BR:
spar03021
]
SPRG_19892
Transcription factors [BR:
spar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SPRG_19892
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SPRG_19892
RNA polymerase III system
TFIIIB
SPRG_19892
RNA polymerase I system
SL1/TIF-1B
SPRG_19892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
24141156
NCBI-ProteinID:
XP_012200119
UniProt:
A0A067CR15
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MTLARKRSKEKAIERAKAKAEAKAKRELPPQERPMTIANIVGSFHLGVKIDLKELVLKAR
NVAYNPRRFSGASMRLQDPKATGVFFCSGKVVMLGLTSEEAFRTTASRLLSIVQKIGYTD
ADIHYLMIHNVTASGCVGYRIRLEGLHNEHYQFSTYEPELFHGLYYRMMEPRVCFIIFVT
GTVTACGAESWDDVLEGFEKLLPALEQFRLRPT
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggcaaggaagcgctctaaggagaaggccatcgagcgggccaaggcgaaggcc
gaggcgaaggccaagcgggagctgccaccccaggagcgaccgatgaccatcgccaacatc
gtcgggtcctttcacttgggcgtcaagatcgatctcaaggagctggtgctcaaggcgcgc
aacgtcgcgtacaacccgcggcggttcagcggcgcgtccatgcgcctccaagaccccaag
gcaaccggcgtcttcttctgctctggcaaggtcgtcatgctcgggctcacgtcggaagaa
gcgttccggacgaccgccagccgccttctcagcatcgtccagaaaatcggctacacagat
gcagatattcactacctgatgatccacaacgtcacggcgtccggctgcgtcgggtatcgc
atccgcctcgagggcctccacaacgaacactaccaatttagcacgtacgagcccgagctc
ttccatggcctctactatcgcatgatggagccccgcgtgtgctttatcatctttgtcacc
ggcactgtgaccgcatgcggcgccgagtcgtgggatgacgtactcgaaggctttgagaag
ctgctgccagcgctcgaacagttccggctccgtcccacttag
DBGET
integrated database retrieval system