Saprolegnia parasitica: SPRG_19954
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Entry
SPRG_19954 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_19954
03015 mRNA surveillance pathway
SPRG_19954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_19954
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_19954
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPRG_19954
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
SPRG_19954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
24141200
NCBI-ProteinID:
XP_012200487
UniProt:
A0A067CPM1
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MRVVERIGARVGPREGDSKRVAAPAPVVIEREKTCPCLIRVFCNATHNRAEAYNAMHETP
LPNELHIYTWMDATLGEVAGLVRDASEEARKHSRLAFSIVLPDRRGKYLLKKAGVVTNRK
SSPDEDKTLASYGFQNGDFPDVALVN
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtggtggaaagaatcggcgcccgggtcggtccgcgcgaaggcgacagcaagcgg
gtcgccgcgcccgcacccgtggtcatcgagcgcgagaagacatgcccatgcctcatccgc
gtcttctgcaatgcgacgcacaaccgggcggaagcgtacaatgccatgcacgagacgcct
cttccgaacgagctgcacatctacacgtggatggatgcgacactgggcgaagtcgctggc
ctcgtgcgtgatgcgagcgaagaggcgcgaaagcactcgcgcctcgctttttcaattgtg
ctgcccgaccgccgcggcaagtacttgctcaagaaggccggcgtcgtgaccaaccgcaag
tcgtcgccggacgaggacaagacgcttgctagctatggctttcagaatggcgactttccc
gacgtcgcgcttgtcaattaa
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